OvRSeq Results

index	AGE	TUMOR_GRADE	CLINICAL_STAGE	TUMOR_RESIDUAL_DISEASE	BRCAness	OS	OS.1	OS_MONTHS	InfiltrationStatus	BRCAness_Prob	Tumor_Molecular_Subtypes	Antigen.processing.and.presentation	BRCAness_neg	BRCAness_pos	CD8.T.cell.exhaustion	CD8	Chemokines	Core.NFkB	CTL	CYT	Cytokines	Cytotoxic.effector.function	Expand.immune	HLAs	IFNG_Ayers	IFNG	Immune.checkpoints	Immune.response	Immunological.Constant.of.Rejection..ICR.	INFG	Inflamed	Integrins	Interferon.alpha.response	IRF3.targets	STING.signaling	T.cell.exclusion	T.cell.exhaustion	TGFb_CAF.marker	B.lineage.Becht.MCPcounter_average	CD8.Jiang_average	CTL.Becht.MCPcounter_average	CTL.Jiang_average	CYT.Rooney_average	Fibroblasts.Becht.MCPcounter_average	IFNG.Ayers_average	IFNG.Higgs_average	IFNG.Jiang_average	Monocytic.lineage.Becht.MCPcounter_average	Myeloid.dendritic.cells.Becht.MCPcounter_average	NK.Barry_average	NK.cells.Becht.MCPcounter_average	SDC.Barry_average	Sample	B.cell.quantiseq	Macrophage.M1.quantiseq	Macrophage.M2.quantiseq	Monocyte.quantiseq	Neutrophil.quantiseq	NK.cell.quantiseq	T.cell.CD4...non.regulatory..quantiseq	T.cell.CD8..quantiseq	T.cell.regulatory..Tregs..quantiseq	Myeloid.dendritic.cell.quantiseq	uncharacterized.cell.quantiseq	B.cell.timer	T.cell.CD4..timer	T.cell.CD8..timer	Neutrophil.timer	Macrophage.timer	Myeloid.dendritic.cell.timer	T.cell.mcp_counter	T.cell.CD8..mcp_counter	cytotoxicity.score.mcp_counter	NK.cell.mcp_counter	B.cell.mcp_counter	Monocyte.mcp_counter	Macrophage.Monocyte.mcp_counter	Myeloid.dendritic.cell.mcp_counter	Neutrophil.mcp_counter	Endothelial.cell.mcp_counter	Cancer.associated.fibroblast.mcp_counter	ratio_CYT_C1QA	BRCAness_immunotype	mapped_ratio_CYT_C1QA	Vulnerability_Score	angiogenesis_score
TCGA-04-1331	78	G3	IIIC	1-10 MM	1	1	1	43.89	Desert	0.818	PRO_consensus	3416.92	7330.029	6431.813	-1346.211	-2464.996	-141.527	5529.101	-2038.543	-2536.117	-3471.246	-3118.732	1030.337	3081.903	2598.507	2598.507	-405.251	-79.202	-36.227	3350.794	-79.202	3390.896	7005.27	7140.742	4773.284	10958.036	2663.575	4889.012	1.178	1.135	0.486	1.341	1.144	6.808	3.139	1.975	4.152	2.692	1.292	0.895	0.369	1.752	TCGA-04-1331	0.009	0.0	0.019	0.157	0.0	0.021	0.034	0.009	0.014	0.0	0.736	0.085	0.183	0.118	0.094	0.091	0.444	1.73	1.172	0.486	0.369	1.178	2.692	2.692	1.292	1.428	2.542	6.808	0.227	noBRIT	0.152	2.389	2
TCGA-04-1341	85	G3	nan	nan	1	0	0	1.08	Desert	0.812	PRO_consensus	4711.917	7388.717	6653.107	-643.67	-867.033	143.664	6444.089	117.723	35.521	-2815.896	-1083.696	2383.72	4893.152	3417.839	3417.839	-27.076	1529.061	1627.321	4068.972	1529.061	3065.825	7189.564	5810.478	5652.627	11050.186	3565.753	5030.275	0.928	0.947	0.549	1.266	1.239	5.924	2.5	1.221	3.281	1.701	0.404	0.685	0.073	0.942	TCGA-04-1341	0.016	0.004	0.021	0.03	0.001	0.006	0.0	0.003	0.021	0.0	0.898	0.088	0.153	0.125	0.08	0.051	0.437	1.412	0.933	0.549	0.073	0.928	1.701	1.701	0.404	0.911	1.29	5.924	0.236	noBRIT	0.181	2.384	0
TCGA-04-1343	72	G3	IV	>20 MM	0	1	1	11.86	Infiltrated	0.062	MES_consensus	5956.467	8079.186	7871.125	801.187	41.052	1638.399	7588.137	1099.939	1653.76	-2247.021	-263.281	3633.779	6865.861	4103.585	4103.585	919.995	2612.228	2445.304	4882.135	2612.228	3806.928	6626.018	5658.352	5025.102	11002.108	3972.653	5986.29	1.7	1.553	0.783	1.94	2.148	7.066	3.108	1.482	3.923	2.656	0.962	0.715	0.194	1.557	TCGA-04-1343	0.027	0.032	0.028	0.061	0.0	0.013	0.0	0.007	0.016	0.0	0.816	0.096	0.175	0.134	0.089	0.071	0.46	2.02	1.166	0.783	0.194	1.7	2.656	2.656	0.962	1.323	1.981	7.066	0.248	other	0.227	0.451	1
TCGA-04-1347	81	G3	IV	NO MACROSCOPIC DISEASE	1	0	0	63.05	Desert	0.796	PRO_consensus	3415.078	7430.349	7305.867	-1447.609	-2255.414	-1225.014	5661.414	-2387.135	-2234.382	-3947.522	-3534.989	-424.38	3686.147	786.277	786.277	-1249.149	-1036.47	-1037.426	1390.455	-1036.47	2129.412	4865.257	4292.564	3464.481	11036.883	2274.633	4430.7	1.191	0.593	0.357	0.571	0.631	5.221	1.702	0.881	2.408	1.39	0.609	0.762	0.135	0.884	TCGA-04-1347	0.011	0.0	0.016	0.031	0.007	0.01	0.005	0.003	0.008	0.007	0.9	0.088	0.155	0.107	0.071	0.059	0.425	1.315	0.697	0.357	0.135	1.191	1.39	1.39	0.609	0.989	1.411	5.221	0.073	noBRIT	0.005	2.152	1
TCGA-04-1356	62	G3	IIC	nan	1	1	1	49.25	Desert	0.852	PRO_consensus	4100.419	7551.24	7375.624	-797.548	-313.221	2094.777	7690.118	951.832	1469.699	-2075.751	-288.011	2606.838	4321.351	3446.681	3446.681	105.298	1530.205	1788.164	4054.55	1530.205	3401.592	5771.736	4803.162	5130.22	11008.162	4107.748	4618.891	0.878	1.785	1.143	2.299	2.512	6.464	3.225	1.567	3.896	2.565	1.095	1.32	0.198	1.743	TCGA-04-1356	0.02	0.044	0.046	0.0	0.017	0.019	0.0	0.005	0.016	0.021	0.811	0.092	0.176	0.13	0.099	0.069	0.459	1.807	1.2	1.143	0.198	0.878	2.565	2.565	1.095	1.5	2.174	6.464	0.4	noBRIT	0.908	2.679	2
TCGA-04-1357	52	G3	IIIB	nan	1	0	0	nan	Infiltrated	0.896	IMR_consensus	8494.912	6805.944	8253.141	3508.048	7160.578	2365.143	7214.033	7418.282	7688.21	-2053.484	5354.626	8939.648	9385.721	9435.124	9435.124	2967.395	6662.943	7060.843	10160.275	6662.943	4902.921	8516.132	7468.578	6708.033	10865.468	6499.324	4030.418	2.348	4.63	2.458	4.743	4.896	5.841	6.461	4.831	7.305	4.248	2.653	1.853	0.396	2.338	TCGA-04-1357	0.03	0.013	0.093	0.049	0.0	0.01	0.0	0.062	0.032	0.0	0.71	0.11	0.19	0.191	0.105	0.092	0.494	3.282	3.896	2.458	0.396	2.348	4.248	4.248	2.653	1.422	2.062	5.841	0.456	BRIT	0.973	2.858	0
TCGA-04-1361	57	G3	IIIB	NO MACROSCOPIC DISEASE	1	0	0	32.49	Infiltrated	0.964	DIF_consensus	7348.932	7254.933	8485.442	582.416	556.711	44.884	6092.568	1377.703	1722.281	-3161.377	9.001	3842.902	8614.733	4944.697	4944.697	739.254	3416.81	2979.301	5839.793	3416.81	3329.955	7382.358	7168.345	5943.135	11007.01	3824.52	4064.371	1.345	2.193	1.34	2.498	2.61	6.471	3.923	1.813	4.786	2.689	0.913	1.312	0.258	1.446	TCGA-04-1361	0.015	0.008	0.052	0.015	0.04	0.012	0.0	0.009	0.02	0.0	0.829	0.108	0.169	0.154	0.092	0.088	0.467	1.752	1.786	1.34	0.258	1.345	2.689	2.689	0.913	1.214	2.431	6.471	0.322	noBRIT	0.62	2.879	1
TCGA-04-1362	59	G3	IIC	1-10 MM	1	1	1	44.29	Infiltrated	0.844	DIF_consensus	5203.693	7752.855	7316.621	-147.545	-2995.747	-149.785	6976.611	-1727.424	-858.155	-3044.768	-2420.855	1835.408	5864.975	4378.293	4378.293	20.273	1183.324	1462.691	5261.671	1183.324	3787.863	7325.821	6867.268	5060.172	10853.534	3039.72	2397.998	0.669	0.813	0.86	1.287	1.635	4.537	3.703	1.304	4.796	2.703	0.807	1.088	0.246	1.735	TCGA-04-1362	0.012	0.011	0.052	0.016	0.009	0.017	0.0	0.004	0.021	0.034	0.825	0.104	0.172	0.13	0.1	0.087	0.458	1.719	0.398	0.86	0.246	0.669	2.703	2.703	0.807	1.592	2.148	4.537	0.187	noBRIT	0.067	2.41	1
TCGA-04-1651	53	G3	IIIC	1-10 MM	1	1	1	36.21	Desert	0.932	DIF_consensus	5497.175	7215.939	8586.113	-400.512	-2783.787	723.562	6925.264	445.249	1381.345	-2680.918	-1280.906	3080.55	6043.648	4624.336	4624.336	410.169	1700.931	2322.397	5494.026	1700.931	2690.582	6831.081	6889.864	5132.582	11100.944	3618.161	1948.785	1.761	0.69	0.762	1.909	2.327	4.497	3.599	1.665	4.573	2.096	0.963	0.926	0.258	1.353	TCGA-04-1651	0.009	0.0	0.019	0.152	0.0	0.014	0.05	0.008	0.008	0.0	0.74	0.099	0.156	0.146	0.091	0.065	0.458	1.718	0.524	0.762	0.258	1.761	2.096	2.096	0.963	1.648	1.848	4.497	0.388	noBRIT	0.881	2.872	1
TCGA-09-0364	80	G3	IIC	11-20 MM	0	1	1	29.14	Desert	0.078	PRO_consensus	1103.389	7640.669	6242.255	-3196.445	-3876.334	-4017.403	5321.596	-4965.06	-5301.968	-4861.642	-5821.297	-3973.176	165.351	-3064.836	-3064.836	-2008.131	-4220.899	-4289.282	-2672.057	-4220.899	652.319	4611.142	2937.457	1941.123	11245.748	1286.906	3620.726	0.9	0.49	0.207	0.293	0.206	5.406	0.949	0.345	1.48	1.264	0.72	0.503	0.105	1.581	TCGA-09-0364	0.006	0.0	0.014	0.023	0.005	0.015	0.053	0.002	0.006	0.016	0.86	0.1	0.153	0.118	0.071	0.069	0.43	0.968	0.296	0.207	0.105	0.9	1.264	1.264	0.72	1.392	2.556	5.406	0.033	other	0.002	0.241	1
TCGA-09-0366	55	G3	IIIC	1-10 MM	0	1	1	57.72	Infiltrated	0.102	IMR_consensus	7400.91	7238.805	5788.255	1743.56	-553.648	949.086	7983.748	92.074	965.822	-2142.426	-1043.106	3754.815	8421.434	4894.894	4894.894	1228.604	3290.656	1978.957	5842.367	3290.656	4150.113	7586.383	6812.714	5614.729	10591.932	4312.97	2188.051	1.081	1.656	0.932	1.934	2.316	4.556	4.12	2.256	4.933	4.429	1.438	1.347	0.317	1.85	TCGA-09-0366	0.014	0.043	0.247	0.0	0.0	0.013	0.0	0.004	0.015	0.0	0.663	0.104	0.187	0.13	0.115	0.111	0.479	1.529	1.333	0.932	0.317	1.081	4.429	4.429	1.438	2.249	1.647	4.556	0.191	other	0.072	0.488	1
TCGA-09-0367	67	G3	IIIC	1-10 MM	1	1	1	17.97	Desert	0.762	DIF_consensus	7334.596	7725.34	8017.641	-39.158	-569.965	1823.377	6960.928	1593.799	2152.305	-1170.179	174.244	3926.602	8370.129	5812.344	5812.344	686.799	3563.79	3449.364	6731.536	3563.79	3268.524	6447.935	5454.932	5242.191	10991.329	4041.175	2303.392	0.573	0.891	0.905	1.652	1.863	3.62	3.679	1.303	4.823	2.024	1.661	1.347	0.094	0.934	TCGA-09-0367	0.022	0.018	0.04	0.031	0.004	0.01	0.01	0.004	0.008	0.0	0.853	0.098	0.145	0.138	0.083	0.06	0.461	1.474	0.815	0.905	0.094	0.573	2.024	2.024	1.661	1.321	1.358	3.62	0.289	noBRIT	0.429	2.316	1
TCGA-09-0369	56	G3	IIIC	NO MACROSCOPIC DISEASE	0	1	1	35.55	Desert	0.182	PRO_consensus	3256.702	6200.644	6282.996	-1016.561	-1767.842	-1678.144	5853.282	-1330.772	-1927.312	-3565.737	-2831.51	-779.167	3894.596	553.074	553.074	-666.078	-1095.323	-1041.413	1155.212	-1095.323	2887.835	4595.563	4053.429	2877.018	11055.852	3093.904	6340.411	0.792	1.108	0.454	1.286	1.027	7.18	1.996	0.812	2.836	2.882	0.92	0.581	0.106	1.718	TCGA-09-0369	0.009	0.004	0.029	0.034	0.018	0.015	0.022	0.003	0.007	0.0	0.859	0.08	0.176	0.106	0.086	0.093	0.441	1.309	1.482	0.454	0.106	0.792	2.882	2.882	0.92	1.379	3.401	7.18	0.189	other	0.069	0.693	3
TCGA-09-1670	57	G3	IIIA	NO MACROSCOPIC DISEASE	0	0	0	17.97	Infiltrated	0.056	IMR_consensus	5974.999	8165.483	6649.939	546.003	-1887.847	-1164.117	6816.596	-1058.571	-88.429	-2705.733	-1888.992	2540.382	6757.039	4294.359	4294.359	524.255	2194.324	1233.949	5202.727	2194.324	3598.77	7925.172	7808.346	5657.322	11132.464	3034.793	2629.443	1.089	1.094	0.676	1.413	1.834	4.947	3.701	1.721	4.623	3.58	1.126	0.899	0.205	1.682	TCGA-09-1670	0.019	0.001	0.109	0.021	0.018	0.012	0.0	0.004	0.014	0.0	0.803	0.103	0.174	0.142	0.099	0.091	0.47	1.67	0.49	0.676	0.205	1.089	3.58	3.58	1.126	1.475	1.702	4.947	0.165	other	0.041	0.337	1
TCGA-09-1673	50	G3	IV	>20 MM	0	0	0	3.02	Infiltrated	0.124	PRO_consensus	5219.079	7453.39	6744.884	953.469	-2734.74	-1075.753	6341.583	-1696.889	-870.046	-3502.181	-2641.291	1245.387	5968.819	2988.12	2988.12	-369.806	1106.913	107.226	3749.14	1106.913	2937.438	6823.17	6536.134	3733.935	11005.835	3297.207	3559.889	1.522	0.925	0.904	1.34	1.689	3.616	3.123	1.749	4.158	3.477	0.98	0.903	0.239	2.09	TCGA-09-1673	0.024	0.0	0.06	0.106	0.0	0.028	0.012	0.004	0.024	0.0	0.743	0.099	0.163	0.143	0.095	0.094	0.462	1.487	0.557	0.904	0.239	1.522	3.477	3.477	0.98	1.299	3.004	3.616	0.255	other	0.254	0.619	1
TCGA-09-2044	77	G3	IIB	NO MACROSCOPIC DISEASE	1	0	0	6.11	Infiltrated	0.854	IMR_consensus	6210.373	7128.222	7700.318	1602.791	1280.192	1096.13	7201.186	1607.54	1828.539	-2037.449	66.364	4079.987	6957.999	5146.062	5146.062	1365.923	3332.59	2652.899	6000.508	3332.59	3464.146	7775.762	7697.158	5209.976	11103.384	4333.283	3774.129	0.988	2.16	1.053	2.298	2.39	4.958	3.921	2.186	4.671	3.54	1.364	1.032	0.124	1.495	TCGA-09-2044	0.043	0.007	0.071	0.068	0.0	0.008	0.0	0.009	0.015	0.0	0.778	0.096	0.175	0.135	0.103	0.081	0.476	1.796	1.79	1.053	0.124	0.988	3.54	3.54	1.364	1.25	2.187	4.958	0.261	BRIT	0.281	2.522	0
TCGA-09-2053	72	G3	IIIC	NO MACROSCOPIC DISEASE	0	0	0	39.72	Infiltrated	0.044	IMR_consensus	6298.439	8633.843	7055.816	710.588	1086.263	1892.431	7125.759	3799.525	3979.579	-2365.01	1886.9	5567.435	7375.211	6735.068	6735.068	752.002	3345.193	4322.952	7542.166	3345.193	2953.661	7625.079	6547.318	5850.507	11032.773	4657.758	4076.581	2.168	2.344	1.445	3.249	3.319	6.059	4.534	3.344	5.375	3.056	1.418	1.819	0.312	1.775	TCGA-09-2053	0.029	0.016	0.039	0.032	0.045	0.012	0.0	0.01	0.014	0.0	0.803	0.102	0.181	0.144	0.092	0.076	0.469	2.313	2.067	1.445	0.312	2.168	3.056	3.056	1.418	1.282	1.919	6.059	0.459	other	0.975	0.649	1
TCGA-09-2056	62	G3	IIIC	NO MACROSCOPIC DISEASE	0	0	0	12.45	Infiltrated	0.156	DIF_consensus	6615.133	7617.973	7291.829	716.245	974.81	1761.163	8050.878	2037.439	2696.939	-781.175	549.139	3714.472	7506.188	4637.159	4637.159	1352.385	3224.984	2923.968	5530.02	3224.984	4009.516	6977.857	6340.512	5516.501	11043.339	4573.6	3707.44	0.746	1.665	0.996	2.061	2.301	4.774	3.239	1.336	4.061	2.742	1.985	1.166	0.094	1.419	TCGA-09-2056	0.007	0.061	0.017	0.129	0.0	0.013	0.0	0.013	0.022	0.0	0.739	0.098	0.15	0.145	0.098	0.064	0.468	1.594	1.186	0.996	0.094	0.746	2.742	2.742	1.985	1.449	1.335	4.774	0.282	other	0.391	0.734	1
TCGA-10-0928	71	G3	IIIC	1-10 MM	0	1	1	18.5	Desert	0.198	PRO_consensus	6140.297	7563.367	7789.768	-867.641	-5286.807	27.275	7462.187	-3410.249	-2639.554	-2726.995	-4074.229	-318.223	6932.562	1342.446	1342.446	-595.238	971.268	-1162.869	1994.39	971.268	2915.674	6758.208	6044.654	4116.099	11187.821	3069.197	3594.621	1.224	0.225	0.454	0.636	0.782	4.89	2.306	0.561	3.193	1.989	1.083	0.906	0.109	1.227	TCGA-10-0928	0.022	0.016	0.063	0.0	0.019	0.014	0.0	0.001	0.013	0.051	0.8	0.1	0.16	0.116	0.086	0.056	0.463	1.323	0.06	0.454	0.109	1.224	1.989	1.989	1.083	1.206	2.507	4.89	0.185	other	0.064	0.73	1
TCGA-10-0931	44	G3	IIIC	1-10 MM	1	1	1	32.85	Desert	0.882	DIF_consensus	6431.496	7252.357	8272.734	-185.731	-723.243	855.492	6962.702	639.618	906.96	-2133.802	-901.96	3082.784	6886.376	4497.94	4497.94	320.168	2399.777	2541.182	5443.597	2399.777	2503.022	7783.202	7355.227	5598.651	11113.229	3893.705	2815.238	0.926	0.995	0.984	1.463	1.558	4.227	3.102	1.21	4.045	2.078	0.353	1.472	0.119	0.904	TCGA-10-0931	0.012	0.075	0.005	0.03	0.0	0.009	0.0	0.005	0.012	0.0	0.853	0.098	0.145	0.139	0.085	0.043	0.461	1.279	0.916	0.984	0.119	0.926	2.078	2.078	0.353	1.011	1.243	4.227	0.249	noBRIT	0.23	2.581	0
TCGA-10-0933	77	G3	IIIC	NO MACROSCOPIC DISEASE	0	1	1	14.65	Desert	0.2	PRO_consensus	4180.915	6920.299	7214.028	-1540.568	3875.61	-693.293	5615.976	689.781	-2077.695	-3309.476	-1834.488	556.2	3562.848	2480.963	2480.963	-818.139	-31.563	1147.762	3146.534	-31.563	1500.199	8062.641	7691.536	5279.123	11069.507	2692.092	4124.354	1.064	3.11	0.593	1.895	0.925	5.762	2.746	1.485	3.523	1.585	0.915	0.528	0.207	1.248	TCGA-10-0933	0.007	0.001	0.026	0.0	0.001	0.009	0.0	0.048	0.002	0.053	0.853	0.097	0.163	0.12	0.087	0.074	0.432	0.998	5.046	0.593	0.207	1.064	1.585	1.585	0.915	1.142	2.433	5.762	0.19	other	0.07	0.74	1
TCGA-10-0937	44	G3	IIIC	1-10 MM	0	1	1	19.98	Infiltrated	0.236	IMR_consensus	7257.608	7044.57	8152.1	1357.768	1268.295	1424.45	6779.427	3262.959	3379.015	-1391.505	1445.505	5128.419	8101.756	5807.765	5807.765	1232.673	3262.329	4005.546	6727.879	3262.329	3050.749	7715.742	6977.604	5845.781	11133.854	4409.693	3550.577	0.524	1.676	1.06	2.384	2.438	5.123	3.786	1.5	4.561	2.664	0.704	1.126	0.083	0.81	TCGA-10-0937	0.012	0.007	0.015	0.117	0.0	0.011	0.01	0.011	0.013	0.0	0.805	0.1	0.157	0.146	0.089	0.061	0.46	1.814	1.537	1.06	0.083	0.524	2.664	2.664	0.704	1.268	1.418	5.123	0.346	other	0.737	1.016	0
TCGA-13-0714	55	G3	IV	1-10 MM	0	1	1	6.21	Infiltrated	0.216	MES_consensus	5693.326	7639.185	7599.179	-16.324	131.118	1275.41	7186.382	1794.016	2773.992	-2539.768	358.884	3975.237	6354.799	4362.181	4362.181	739.805	1784.001	2460.623	5207.428	1784.001	4376.546	6110.746	4959.483	5217.088	11119.975	3742.327	6468.177	1.952	1.462	0.886	2.062	2.422	6.89	3.07	1.265	3.724	2.34	1.279	0.781	0.19	1.438	TCGA-13-0714	0.011	0.002	0.013	0.105	0.0	0.008	0.043	0.009	0.017	0.0	0.792	0.097	0.175	0.134	0.084	0.067	0.458	1.455	1.306	0.886	0.19	1.952	2.34	2.34	1.279	1.278	2.06	6.89	0.305	other	0.521	0.916	1
TCGA-13-0724	72	G3	IV	1-10 MM	0	1	1	2.73	Desert	0.046	DIF_consensus	5665.057	8573.952	6881.164	-679.624	635.59	638.993	7218.031	625.985	593.68	-2803.984	-748.627	2646.474	6272.224	3401.762	3401.762	-32.421	1901.564	1868.818	4114.271	1901.564	2883.696	6939.079	6082.536	5575.554	11101.864	3318.616	4493.278	1.384	1.823	0.787	1.797	1.751	5.905	2.819	1.301	3.537	1.988	1.087	0.91	0.175	1.115	TCGA-13-0724	0.017	0.003	0.033	0.05	0.0	0.015	0.008	0.009	0.007	0.003	0.854	0.097	0.169	0.125	0.088	0.067	0.448	1.712	1.747	0.787	0.175	1.384	1.988	1.988	1.087	1.342	1.483	5.905	0.202	other	0.091	0.355	0
TCGA-13-0765	50	G3	IIIC	1-10 MM	0	1	1	45.63	Desert	0.114	DIF_consensus	7748.466	8496.175	7129.387	699.975	-442.612	1468.76	7876.479	602.804	1069.555	-1758.374	-608.024	2973.178	8738.43	3276.928	3276.928	672.729	2605.592	2128.532	4029.193	2605.592	2895.142	6817.403	5565.566	5958.646	10839.978	4385.746	2306.282	0.585	0.979	0.563	1.345	1.515	3.397	2.543	0.67	3.435	2.515	1.373	0.518	0.076	0.938	TCGA-13-0765	0.021	0.074	0.015	0.068	0.0	0.009	0.0	0.007	0.022	0.0	0.786	0.094	0.17	0.117	0.088	0.056	0.467	1.799	0.791	0.563	0.076	0.585	2.515	2.515	1.373	1.514	1.232	3.397	0.21	other	0.108	0.541	1
TCGA-13-0768	73	G3	IIIC	1-10 MM	0	1	1	58.61	Infiltrated	0.1	IMR_consensus	7385.141	7713.153	6779.229	3863.234	7933.844	3588.33	6548.585	8751.039	8409.087	-1580.352	6264.105	9251.84	8225.21	9557.595	9557.595	3217.038	5658.206	7959.865	10386.711	5658.206	5887.084	8671.176	8027.575	6713.199	10790.683	6944.826	7900.775	2.003	4.985	2.805	5.487	5.296	8.313	6.574	4.711	7.269	4.394	1.911	2.766	0.504	2.805	TCGA-13-0768	0.018	0.082	0.074	0.0	0.044	0.016	0.0	0.067	0.056	0.0	0.643	0.088	0.204	0.194	0.114	0.099	0.489	3.355	4.631	2.805	0.504	2.003	4.394	4.394	1.911	1.927	3.23	8.313	0.641	other	1.0	1.007	3
TCGA-13-0795	66	G3	IIIC	>20 MM	0	1	1	20.34	Infiltrated	0.208	IMR_consensus	7689.959	7774.574	6987.419	1444.526	2824.378	629.269	7071.3	2519.682	3173.409	-1894.583	1433.928	4992.146	8933.711	5657.616	5657.616	1330.799	4294.239	3582.196	6568.051	4294.239	3844.961	7912.762	7484.303	6038.149	10936.971	4337.081	3605.757	0.936	2.474	1.209	2.324	2.527	5.275	3.847	1.781	4.478	3.539	1.176	1.405	0.243	1.446	TCGA-13-0795	0.022	0.0	0.077	0.084	0.0	0.01	0.0	0.016	0.012	0.0	0.78	0.106	0.17	0.152	0.099	0.106	0.451	2.112	2.23	1.209	0.243	0.936	3.539	3.539	1.176	1.196	1.678	5.275	0.164	other	0.04	0.732	0
TCGA-13-0800	52	G3	IIIC	NO MACROSCOPIC DISEASE	0	0	0	87.43	Desert	0.044	PRO_consensus	2704.279	8402.002	6253.462	-2397.265	-2686.562	-3813.134	5021.648	-3187.288	-4015.19	-4424.203	-4893.418	-2276.904	1880.26	-870.857	-870.857	-1582.297	-2821.727	-2422.672	-330.736	-2821.727	1136.402	7107.922	6545.987	3693.067	11017.79	1649.645	2810.686	1.23	0.996	0.338	0.758	0.46	4.806	1.71	0.705	2.51	1.429	0.612	0.678	0.112	1.038	TCGA-13-0800	0.014	0.0	0.035	0.001	0.007	0.013	0.012	0.004	0.007	0.036	0.87	0.089	0.162	0.118	0.078	0.063	0.434	1.401	0.244	0.338	0.112	1.23	1.429	1.429	0.612	1.28	1.887	4.806	0.166	other	0.042	0.308	1
TCGA-13-0804	73	G3	IIIC	1-10 MM	0	1	1	35.25	Infiltrated	0.154	DIF_consensus	7021.968	7643.015	7099.269	680.68	-177.096	1471.61	7084.826	3126.319	4654.138	-1899.473	1602.674	4387.453	8061.083	5042.221	5042.221	1072.993	3352.15	3462.161	5891.754	3352.15	3362.456	6834.252	6304.918	5697.536	10984.883	4200.501	2464.746	0.911	1.367	1.337	2.536	3.139	4.058	3.472	1.498	4.166	3.232	1.336	2.214	0.268	1.179	TCGA-13-0804	0.012	0.024	0.04	0.08	0.0	0.021	0.04	0.01	0.009	0.0	0.764	0.1	0.162	0.151	0.095	0.086	0.452	1.677	1.094	1.337	0.268	0.911	3.232	3.232	1.336	1.328	1.827	4.058	0.354	other	0.773	0.813	1
TCGA-13-0883	61	G3	IIIC	1-10 MM	1	1	1	68.9	Infiltrated	0.776	MES_consensus	5552.727	7341.079	6635.054	312.643	-104.517	1651.79	7207.293	608.388	1039.073	-1972.847	-925.677	2651.72	6588.913	3853.161	3853.161	571.224	2294.064	1740.403	4526.231	2294.064	4868.7	5851.037	5086.292	4954.255	11062.988	3830.134	7587.898	1.071	2.157	0.921	2.454	2.594	8.392	3.632	2.265	4.512	3.739	1.583	0.509	0.154	1.828	TCGA-13-0883	0.019	0.077	0.075	0.033	0.005	0.022	0.0	0.011	0.028	0.0	0.732	0.088	0.179	0.146	0.108	0.095	0.486	1.831	1.537	0.921	0.154	1.071	3.739	3.739	1.583	2.055	2.792	8.392	0.293	noBRIT	0.451	2.357	3
TCGA-13-0884	39	G3	IIIC	1-10 MM	0	1	1	107.1	Infiltrated	0.086	DIF_consensus	6671.285	8618.816	6910.292	2243.9	2770.164	986.206	6915.844	4965.422	6282.453	-2464.755	3153.868	5941.497	7618.685	7019.476	7019.476	1642.105	3734.225	5000.912	7991.454	3734.225	3778.759	8142.759	7313.464	6532.093	11169.615	4959.594	5573.911	1.072	2.562	1.931	3.364	3.888	6.485	4.359	2.37	4.825	2.099	1.032	2.099	0.509	1.135	TCGA-13-0884	0.027	0.023	0.019	0.054	0.0	0.012	0.0	0.014	0.019	0.0	0.832	0.094	0.166	0.173	0.088	0.061	0.464	2.223	2.204	1.931	0.509	1.072	2.099	2.099	1.032	1.183	1.49	6.485	0.502	other	0.99	0.808	0
TCGA-13-0885	70	G3	IIIC	11-20 MM	1	0	0	111.31	Infiltrated	0.848	IMR_consensus	8331.876	7610.639	8012.492	2129.98	4065.934	2194.459	7839.555	4680.565	5308.724	-1504.896	3039.854	7344.716	9194.181	8518.257	8518.257	1958.974	5592.217	5841.187	9320.08	5592.217	3827.226	8439.363	7251.488	6287.639	11123.181	4888.612	3864.912	1.466	3.025	1.371	3.257	3.495	5.462	5.52	3.65	6.548	3.625	2.115	1.114	0.257	1.983	TCGA-13-0885	0.016	0.004	0.099	0.043	0.0	0.007	0.0	0.022	0.031	0.0	0.779	0.111	0.178	0.163	0.094	0.08	0.483	2.513	2.595	1.371	0.257	1.466	3.625	3.625	2.115	1.019	1.465	5.462	0.308	BRIT	0.537	2.561	0
TCGA-13-0886	67	G3	IIIC	1-10 MM	1	0	0	153.26	Infiltrated	0.812	IMR_consensus	7775.596	6896.073	7420.69	1483.513	978.009	2413.862	7471.713	2745.142	3797.35	-2253.665	1439.059	5877.568	8687.46	7159.79	7159.79	1682.189	4305.238	4323.607	8094.75	4305.238	4150.661	8459.538	7683.103	6202.814	10935.466	4855.664	6727.984	1.537	2.11	1.413	2.754	3.149	7.31	4.831	2.529	5.663	3.707	1.56	1.772	0.311	1.847	TCGA-13-0886	0.015	0.028	0.06	0.0	0.023	0.011	0.002	0.009	0.025	0.017	0.811	0.096	0.182	0.151	0.101	0.093	0.473	2.032	1.534	1.413	0.311	1.537	3.707	3.707	1.56	1.197	2.351	7.31	0.369	BRIT	0.828	2.539	1
TCGA-13-0887	42	G3	IIIC	1-10 MM	1	1	1	66.63	Desert	0.938	DIF_consensus	6482.709	7387.855	8274.089	-856.192	-2596.696	1473.233	7371.325	-487.617	-234.698	-1201.702	-1467.041	2937.462	7474.757	4805.836	4805.836	511.082	2941.265	2025.99	5756.341	2941.265	3067.082	7871.651	6995.48	5824.998	11059.831	3573.528	4321.022	0.923	0.616	0.702	1.286	1.35	5.816	3.642	1.249	4.775	2.017	0.775	1.431	0.179	1.427	TCGA-13-0887	0.023	0.016	0.028	0.07	0.0	0.01	0.011	0.006	0.009	0.0	0.828	0.101	0.158	0.118	0.092	0.058	0.457	1.44	0.211	0.702	0.179	0.923	2.017	2.017	0.775	0.887	1.707	5.816	0.223	noBRIT	0.14	2.696	1
TCGA-13-0888	78	G3	IIIC	NO MACROSCOPIC DISEASE	1	1	1	92.35	Desert	0.724	PRO_consensus	2024.913	7898.679	6078.413	-1859.848	-5749.934	-2973.695	5497.514	-5541.201	-6014.872	-3991.14	-5215.993	-2824.518	2278.345	-1913.617	-1913.617	-1609.252	-2208.174	-3209.781	-1471.35	-2208.174	2052.446	4242.097	4147.183	3015.895	10989.4	2063.442	4261.32	1.226	0.198	0.329	0.196	0.129	6.094	1.149	0.566	1.664	1.54	0.428	0.344	0.197	1.412	TCGA-13-0888	0.013	0.0	0.023	0.015	0.002	0.007	0.033	0.001	0.006	0.021	0.878	0.082	0.155	0.118	0.075	0.074	0.421	1.236	0.0	0.329	0.197	1.226	1.54	1.54	0.428	1.035	2.13	6.094	0.064	noBRIT	0.004	1.955	2
TCGA-13-0891	73	G3	IV	NO MACROSCOPIC DISEASE	1	1	1	102.77	Desert	0.868	DIF_consensus	6500.191	8146.321	7808.22	-254.32	-1865.893	-661.179	6313.968	786.413	677.89	-2635.342	-486.326	2995.823	7822.658	4714.861	4714.861	319.671	2207.565	2574.739	5520.239	2207.565	2588.797	7325.837	6741.491	5966.346	10913.697	3621.361	4093.209	0.169	0.715	1.093	1.648	1.628	4.747	3.449	1.787	4.451	1.574	0.673	1.548	0.153	1.261	TCGA-13-0891	0.012	0.013	0.013	0.219	0.0	0.009	0.019	0.012	0.021	0.0	0.683	0.091	0.146	0.142	0.079	0.06	0.447	1.387	0.376	1.093	0.153	0.169	1.574	1.574	0.673	1.413	1.751	4.747	0.454	noBRIT	0.972	2.783	0
TCGA-13-0893	48	G3	IIIC	11-20 MM	1	1	1	43.33	Infiltrated	0.978	IMR_consensus	7216.121	7133.77	8450.576	1072.227	1200.618	760.188	6782.826	3913.489	5636.383	-2501.979	1254.781	5328.264	8371.976	6871.58	6871.58	1014.676	3949.903	4322.053	7796.46	3949.903	4461.713	7838.446	7426.33	6279.994	11045.318	4406.613	5201.285	0.88	2.3	1.499	3.405	4.16	6.762	4.869	2.588	5.802	3.111	0.781	1.807	0.556	1.364	TCGA-13-0893	0.03	0.019	0.063	0.035	0.002	0.023	0.0	0.009	0.02	0.0	0.8	0.098	0.166	0.172	0.093	0.086	0.469	2.226	1.817	1.499	0.556	0.88	3.111	3.111	0.781	1.465	1.899	6.762	0.5	BRIT	0.99	3.123	0
TCGA-13-0897	54	G3	IIIC	1-10 MM	1	1	1	71.69	Infiltrated	0.896	DIF_consensus	7512.236	7672.756	7834.732	930.829	646.762	991.688	6904.845	3440.039	4146.268	-2149.456	1608.098	5308.536	8266.91	6683.917	6683.917	1768.875	3897.669	4419.907	7546.672	3897.669	4059.027	8206.063	7514.186	6088.809	10953.49	4886.942	6018.934	0.732	1.671	1.064	2.779	3.103	7.193	4.414	2.587	5.446	2.998	1.335	1.043	0.172	1.502	TCGA-13-0897	0.007	0.013	0.035	0.002	0.025	0.013	0.04	0.005	0.008	0.001	0.852	0.093	0.165	0.151	0.091	0.073	0.48	1.924	1.349	1.064	0.172	0.732	2.998	2.998	1.335	1.314	1.752	7.193	0.437	noBRIT	0.959	2.836	1
TCGA-13-0905	51	G3	IIIC	nan	1	0	0	123.07	Desert	0.94	DIF_consensus	7197.75	7722.536	9451.247	-727.653	166.938	1308.587	6900.029	-107.682	-532.562	-1671.739	-1662.154	3338.803	7755.432	5473.57	5473.57	328.527	2853.99	2198.266	6413.384	2853.99	3152.568	8082.261	7637.619	4691.024	10836.262	3236.209	3243.824	0.818	1.849	0.842	1.729	1.544	5.255	4.172	1.707	5.341	2.194	0.963	0.866	0.071	1.291	TCGA-13-0905	0.019	0.015	0.026	0.056	0.0	0.008	0.021	0.01	0.014	0.0	0.831	0.099	0.173	0.129	0.089	0.064	0.471	1.816	2.078	0.842	0.071	0.818	2.194	2.194	0.963	1.443	1.976	5.255	0.271	noBRIT	0.331	2.757	1
TCGA-13-0906	50	G3	IIIC	1-10 MM	0	0	0	118.9	Desert	0.134	PRO_consensus	4940.964	7636.814	7322.506	-275.392	7.804	1728.392	6878.793	962.472	442.419	-2705.386	-572.5	4064.345	5050.595	6321.594	6321.594	368.323	2558.147	2937.625	7202.567	2558.147	2829.137	7634.937	7230.05	5525.162	11051.914	4180.172	3956.001	0.83	1.781	0.97	2.18	1.985	5.137	4.634	2.469	5.671	2.354	1.226	1.06	0.127	1.725	TCGA-13-0906	0.019	0.009	0.032	0.0	0.013	0.011	0.0	0.006	0.014	0.034	0.86	0.108	0.167	0.132	0.094	0.074	0.452	1.92	1.475	0.97	0.127	0.83	2.354	2.354	1.226	1.285	1.839	5.137	0.386	other	0.876	0.798	1
TCGA-13-0908	58	G3	IV	1-10 MM	1	1	1	60.55	Infiltrated	0.948	MES_consensus	5939.554	5699.607	7684.777	1021.798	-1739.278	851.789	7401.202	-252.073	-190.775	-2453.281	-1128.992	3597.747	6493.913	4690.66	4690.66	1107.212	2525.505	2145.037	5523.551	2525.505	5265.419	8015.855	7644.158	5342.672	10806.018	4009.177	7284.663	1.207	1.426	0.966	2.067	2.128	7.855	4.063	2.705	4.909	3.981	1.349	0.809	0.204	1.907	TCGA-13-0908	0.018	0.083	0.029	0.183	0.0	0.01	0.045	0.012	0.04	0.0	0.581	0.097	0.189	0.14	0.107	0.095	0.483	1.959	0.872	0.966	0.204	1.207	3.981	3.981	1.349	1.684	3.028	7.855	0.32	noBRIT	0.606	2.835	2
TCGA-13-0911	55	G3	IV	1-10 MM	1	1	1	44.52	Infiltrated	0.83	IMR_consensus	7464.884	7524.056	7333.342	1012.355	-503.786	3020.346	8238.624	977.439	788.258	-1411.794	-310.427	4249.872	8362.709	4779.325	4779.325	1659.762	3002.823	2802.958	5618.827	3002.823	4379.684	7317.962	6543.123	6349.285	10905.899	4959.11	6492.411	1.132	1.154	0.872	1.682	1.616	6.861	3.397	1.325	4.183	3.708	2.561	0.872	0.079	1.703	TCGA-13-0911	0.014	0.078	0.023	0.146	0.0	0.013	0.0	0.011	0.017	0.0	0.699	0.09	0.185	0.112	0.103	0.07	0.491	1.634	0.849	0.872	0.079	1.132	3.708	3.708	2.561	1.254	1.788	6.861	0.249	BRIT	0.229	2.445	1
TCGA-13-0913	53	G3	IIIC	NO MACROSCOPIC DISEASE	1	0	0	109.24	Desert	0.852	IMR_consensus	7836.701	7067.655	8893.391	1170.874	3225.176	3461.507	6275.723	4007.868	2840.749	-1287.281	1970.757	5979.58	8742.451	7045.92	7045.92	1177.16	5501.027	4676.253	7958.031	5501.027	3104.831	7790.362	6080.875	5575.22	11154.861	5271.398	4051.333	1.361	1.877	0.939	2.16	1.753	4.503	4.086	1.768	5.176	1.856	1.518	0.818	0.098	1.02	TCGA-13-0913	0.02	0.004	0.0	0.079	0.0	0.004	0.006	0.01	0.01	0.0	0.868	0.097	0.141	0.149	0.084	0.048	0.444	1.646	1.716	0.939	0.098	1.361	1.856	1.856	1.518	0.558	0.797	4.503	0.368	noBRIT	0.824	2.642	0
TCGA-13-0916	49	G3	IIIC	NO MACROSCOPIC DISEASE	1	0	0	58.64	Infiltrated	0.914	IMR_consensus	8587.842	7251.007	8224.287	594.73	1279.877	-177.445	6968.446	3108.423	3741.936	-3185.281	1103.287	5797.956	9594.789	7130.261	7130.261	744.711	5253.381	4062.798	7988.934	5253.381	2897.117	8618.997	7383.362	5382.217	11079.129	4430.563	3067.665	1.87	2.557	1.256	3.259	3.536	5.364	5.436	3.406	6.583	3.053	0.595	0.787	0.166	1.965	TCGA-13-0916	0.013	0.085	0.082	0.0	0.04	0.016	0.0	0.012	0.026	0.0	0.727	0.097	0.179	0.156	0.09	0.069	0.478	1.795	2.051	1.256	0.166	1.87	3.053	3.053	0.595	1.327	2.735	5.364	0.471	BRIT	0.98	2.922	1
TCGA-13-0920	65	G3	IIIC	1-10 MM	1	1	1	48.76	Desert	0.964	PRO_consensus	4919.554	6555.507	8612.441	-858.432	-679.396	-165.288	6014.919	431.553	282.594	-3923.752	-1261.364	2861.035	5369.807	4572.555	4572.555	-700.64	1261.286	1802.351	5349.476	1261.286	1892.562	6450.994	5921.664	4625.313	11211.028	3473.624	3388.637	1.662	1.466	0.799	1.888	1.83	5.431	3.543	1.98	4.485	1.99	0.655	0.946	0.089	1.489	TCGA-13-0920	0.017	0.0	0.025	0.0	0.041	0.009	0.0	0.003	0.008	0.019	0.877	0.102	0.151	0.142	0.081	0.069	0.434	1.481	1.022	0.799	0.089	1.662	1.99	1.99	0.655	0.869	1.797	5.431	0.383	noBRIT	0.869	2.95	1
TCGA-13-0923	74	G3	IIIC	NO MACROSCOPIC DISEASE	1	0	0	83.68	Desert	0.792	DIF_consensus	7142.2	7824.603	8025.644	496.96	1196.562	650.058	6708.395	3014.675	2842.838	-2188.148	1066.268	5124.448	7589.775	5940.988	5940.988	582.938	3169.114	3921.763	6865.276	3169.114	2299.691	8603.885	7700.879	6205.935	11008.65	4259.512	2455.087	0.73	1.803	1.27	2.477	2.429	3.671	4.022	2.229	4.949	2.21	0.44	1.646	0.102	0.962	TCGA-13-0923	0.013	0.004	0.039	0.034	0.009	0.012	0.0	0.009	0.01	0.0	0.871	0.087	0.157	0.148	0.084	0.063	0.45	1.643	1.279	1.27	0.102	0.73	2.21	2.21	0.44	1.03	1.608	3.671	0.397	noBRIT	0.901	2.519	0
TCGA-13-1403	48	G3	IIIC	nan	0	1	1	77.04	Desert	0.146	DIF_consensus	5753.191	8262.266	6940.48	-1318.751	-3970.088	-2.211	7590.156	-1227.038	160.66	-2237.183	-2544.865	1263.844	6652.661	3396.333	3396.333	-78.909	387.016	813.589	4267.002	387.016	3507.753	7403.943	7308.192	5043.086	10872.77	2879.943	5812.812	0.945	0.438	0.692	1.391	1.905	6.846	3.153	0.925	3.989	2.026	1.176	1.1	0.135	1.212	TCGA-13-1403	0.013	0.025	0.055	0.024	0.018	0.01	0.06	0.0	0.009	0.0	0.786	0.099	0.166	0.13	0.094	0.063	0.471	1.368	0.176	0.692	0.135	0.945	2.026	2.026	1.176	1.583	2.342	6.846	0.335	other	0.686	0.77	1
TCGA-13-1404	48	G3	IIIC	1-10 MM	1	0	0	81.12	Infiltrated	0.94	MES_consensus	6670.371	7191.789	8993.653	-542.502	-1925.644	1490.749	6166.018	-957.834	-766.825	-3044.355	-1509.921	2867.487	7939.98	4189.119	4189.119	288.832	3147.685	1581.299	4981.898	3147.685	3981.817	6681.514	6784.435	5006.21	11254.056	3535.372	5934.536	1.379	0.933	0.695	1.325	1.402	6.675	3.438	1.689	4.435	2.757	1.287	0.994	0.181	1.307	TCGA-13-1404	0.01	0.003	0.015	0.126	0.0	0.011	0.018	0.008	0.012	0.0	0.798	0.101	0.169	0.126	0.089	0.079	0.461	1.298	0.652	0.695	0.181	1.379	2.757	2.757	1.287	1.282	2.231	6.675	0.205	noBRIT	0.096	2.679	1
TCGA-13-1405	49	G3	IV	1-10 MM	0	1	1	28.52	Infiltrated	0.204	MES_consensus	5476.711	7722.084	6968.601	625.834	1383.817	1357.608	7372.372	3889.549	3939.376	-2598.234	1509.894	4820.576	5972.095	6125.319	6125.319	1128.32	2642.513	3783.672	6937.989	2642.513	4897.024	6867.997	5830.315	5090.987	10889.435	3843.973	6684.289	1.371	2.562	1.364	3.552	3.657	7.561	4.511	2.286	5.377	3.255	1.095	1.175	0.289	1.69	TCGA-13-1405	0.009	0.1	0.073	0.211	0.0	0.015	0.026	0.025	0.017	0.0	0.523	0.089	0.18	0.168	0.099	0.098	0.468	2.05	1.946	1.364	0.289	1.371	3.255	3.255	1.095	1.662	2.555	7.561	0.57	other	0.998	1.195	2
TCGA-13-1409	73	G3	IIIC	1-10 MM	0	1	1	57.23	Desert	0.042	PRO_consensus	4188.572	8415.119	6118.265	-1815.294	-3856.891	-3023.546	5552.012	-4200.492	-4461.891	-4267.183	-5171.407	-1819.827	4706.526	-286.285	-286.285	-1385.888	-1087.153	-2475.435	289.768	-1087.153	1426.952	5847.152	5891.711	4125.747	11065.616	1997.648	4094.327	0.971	0.407	0.215	0.331	0.28	5.202	1.562	0.529	2.383	1.248	0.332	0.681	0.173	1.086	TCGA-13-1409	0.031	0.0	0.004	0.062	0.0	0.009	0.0	0.002	0.008	0.0	0.884	0.097	0.146	0.122	0.07	0.057	0.432	1.339	0.201	0.215	0.173	0.971	1.248	1.248	0.332	1.209	1.688	5.202	0.061	other	0.004	0.18	1
TCGA-13-1411	81	G3	IIIC	>20 MM	0	1	1	17.45	Infiltrated	0.236	MES_consensus	7192.446	6857.538	7304.839	2286.052	2713.828	2950.025	8196.734	6191.446	7417.115	-1579.066	3917.354	6665.475	8269.537	7034.668	7034.668	1891.214	4672.812	5317.596	7806.702	4672.812	5446.864	7079.921	6009.295	5451.651	10939.287	5385.559	7669.904	1.332	3.058	1.881	4.409	4.874	8.162	4.957	3.552	5.545	5.136	2.824	1.88	0.287	2.192	TCGA-13-1411	0.02	0.095	0.053	0.0	0.035	0.014	0.0	0.018	0.021	0.013	0.731	0.083	0.197	0.163	0.123	0.112	0.485	2.355	2.535	1.881	0.287	1.332	5.136	5.136	2.824	2.295	2.517	8.162	0.562	other	0.998	1.268	2
TCGA-13-1483	61	G3	IIIC	>20 MM	1	1	1	29.4	Infiltrated	0.876	MES_consensus	6997.36	6706.878	8158.539	-219.81	-1368.846	2205.373	7163.137	-143.02	-303.323	-1594.169	-1445.182	3741.675	8347.476	5010.294	5010.294	617.971	3347.865	2139.407	5959.27	3347.865	3902.8	7746.186	7322.905	5413.748	11226.406	3834.086	6403.476	0.382	1.047	0.672	1.554	1.494	7.204	3.94	1.465	5.148	2.864	0.896	0.773	0.133	1.237	TCGA-13-1483	0.011	0.024	0.026	0.078	0.0	0.007	0.042	0.005	0.01	0.0	0.796	0.102	0.172	0.118	0.1	0.072	0.469	1.636	0.804	0.672	0.133	0.382	2.864	2.864	0.896	1.51	2.226	7.204	0.305	noBRIT	0.521	2.63	1
TCGA-13-1488	59	G3	IV	11-20 MM	1	1	1	70.77	Infiltrated	0.868	IMR_consensus	7655.655	7532.965	8050.393	306.873	1479.839	2793.861	7161.841	3162.727	1990.746	-2371.168	881.353	5825.245	8467.55	7410.346	7410.346	1000.19	4328.035	4719.963	8314.08	4328.035	3037.989	8389.328	7195.548	6124.937	10997.034	4715.397	4092.568	1.808	2.335	1.378	2.957	2.547	5.938	5.372	3.112	6.606	2.924	1.687	1.704	0.174	1.303	TCGA-13-1488	0.021	0.013	0.036	0.024	0.022	0.012	0.0	0.01	0.016	0.015	0.829	0.111	0.169	0.147	0.094	0.061	0.48	2.167	1.868	1.378	0.174	1.808	2.924	2.924	1.687	1.252	1.801	5.938	0.552	BRIT	0.997	2.897	0
TCGA-13-1492	66	G3	IIIC	nan	0	1	1	125.47	Desert	0.2	PRO_consensus	4943.668	7509.032	7806.306	-1168.108	6045.056	-1338.316	6170.066	1738.692	-2441.935	-3920.697	-1222.437	1204.394	5126.328	2659.805	2659.805	-477.697	518.42	1210.457	3425.09	518.42	1535.326	7657.871	7763.07	5190.659	11014.331	2763.78	3443.254	1.415	4.676	0.551	2.616	0.825	4.421	2.976	1.433	4.099	1.912	0.684	0.385	0.317	0.709	TCGA-13-1492	0.0	0.0	0.053	0.0	0.0	0.0	0.0	0.227	0.0	0.095	0.625	0.1	0.15	0.133	0.085	0.067	0.463	1.314	7.596	0.551	0.317	1.415	1.912	1.912	0.684	1.623	1.858	4.421	0.21	other	0.108	0.764	0
TCGA-13-1496	65	G3	IIIC	>20 MM	0	1	1	4.24	Infiltrated	0.14	IMR_consensus	7843.502	8510.465	7343.042	1262.002	1856.32	1948.178	7463.731	5427.032	6052.336	-1506.615	3336.567	6924.121	8706.437	8412.273	8412.273	1877.41	4468.381	5809.627	9218.501	4468.381	3357.533	9288.113	7865.873	6926.181	10966.362	5201.269	2624.681	1.466	2.209	1.766	3.682	3.889	4.195	5.759	3.307	6.41	3.317	1.478	2.619	0.256	0.981	TCGA-13-1496	0.023	0.032	0.043	0.0	0.025	0.008	0.0	0.009	0.017	0.009	0.834	0.108	0.165	0.164	0.102	0.081	0.46	2.044	1.75	1.766	0.256	1.466	3.317	3.317	1.478	1.419	1.457	4.195	0.541	other	0.996	0.994	0
TCGA-13-1497	47	G3	IIIC	nan	1	0	0	127.18	Infiltrated	0.898	IMR_consensus	4973.004	7468.283	8295.606	-384.709	-472.298	1274.425	6684.923	1054.603	1137.649	-2507.192	-733.857	3851.091	4764.06	5380.407	5380.407	609.806	2358.491	2796.783	6315.396	2358.491	2895.409	7880.086	7200.871	5555.424	11124.422	3760.783	5147.195	1.374	1.501	0.831	2.136	2.194	6.635	4.164	2.267	5.168	2.493	0.95	1.205	0.123	1.225	TCGA-13-1497	0.012	0.01	0.033	0.062	0.0	0.014	0.017	0.007	0.011	0.0	0.834	0.094	0.174	0.136	0.097	0.076	0.454	1.746	0.977	0.831	0.123	1.374	2.493	2.493	0.95	1.407	2.491	6.635	0.349	BRIT	0.749	2.738	1
TCGA-13-1498	73	G3	IIIC	>20 MM	1	1	1	66.1	Infiltrated	0.764	IMR_consensus	8578.358	7533.236	8103.666	803.033	1850.235	2576.808	6803.974	4174.597	4589.927	-1493.194	2354.655	5886.632	9603.781	7494.785	7494.785	1489.885	4999.798	4984.468	8320.162	4999.798	3306.761	7921.79	7375.823	6056.708	11046.472	4894.215	4496.93	0.898	2.302	1.683	3.157	3.333	5.784	5.013	2.818	5.948	2.76	1.861	2.019	0.326	1.463	TCGA-13-1498	0.008	0.039	0.049	0.0	0.03	0.014	0.005	0.009	0.015	0.005	0.826	0.104	0.163	0.163	0.096	0.068	0.479	1.609	1.88	1.683	0.326	0.898	2.76	2.76	1.861	1.074	1.578	5.784	0.49	BRIT	0.987	2.555	1
TCGA-13-1499	56	G3	IIIC	nan	1	0	0	114.99	Infiltrated	0.888	MES_consensus	6559.081	7448.112	8007.926	1945.344	4169.941	3183.75	6033.201	4895.736	4479.72	-2118.835	3004.605	6912.223	7744.592	6968.892	6968.892	1712.96	4250.627	5004.795	7922.216	4250.627	3156.944	7577.52	7171.393	5872.044	10916.102	5573.022	6828.682	3.863	3.561	1.922	3.781	3.62	7.437	4.801	3.139	5.505	3.595	2.119	1.618	0.289	2.629	TCGA-13-1499	0.048	0.017	0.043	0.029	0.0	0.009	0.02	0.023	0.024	0.0	0.787	0.107	0.199	0.169	0.103	0.081	0.482	2.985	3.346	1.922	0.289	3.863	3.595	3.595	2.119	1.294	2.509	7.437	0.426	noBRIT	0.946	2.802	3
TCGA-13-1501	50	G3	IV	>20 MM	1	1	1	43.17	Desert	0.96	MES_consensus	4218.738	6497.178	8503.64	-949.672	-1735.063	199.405	6186.985	-1594.993	-1349.24	-3157.753	-2143.51	1415.003	5033.791	2736.341	2736.341	-55.149	488.765	738.871	3382.664	488.765	3742.365	5683.844	5038.223	4320.527	11084.768	3364.417	6477.533	0.854	0.797	0.556	0.849	0.944	6.674	2.449	1.129	3.312	2.332	0.418	0.878	0.15	0.96	TCGA-13-1501	0.017	0.012	0.03	0.038	0.0	0.007	0.038	0.002	0.006	0.003	0.847	0.092	0.16	0.127	0.082	0.071	0.454	1.157	0.654	0.556	0.15	0.854	2.332	2.332	0.418	1.064	1.827	6.674	0.106	noBRIT	0.011	2.616	1
TCGA-13-1505	63	G3	IIIC	1-10 MM	1	0	0	65.64	Infiltrated	0.906	MES_consensus	5829.257	7018.962	8079.364	53.495	355.281	78.97	5999.656	118.691	997.328	-3599.01	-1271.453	2970.497	7001.304	3747.715	3747.715	-5.362	2043.49	991.122	4533.705	2043.49	4135.734	6440.596	6077.738	4270.359	10992.206	3830.121	6633.186	1.61	2.366	0.853	2.211	2.566	7.518	3.607	2.268	4.384	3.25	1.617	0.855	0.242	1.815	TCGA-13-1505	0.014	0.009	0.038	0.138	0.0	0.014	0.007	0.017	0.02	0.0	0.745	0.103	0.173	0.152	0.093	0.085	0.463	1.805	2.324	0.853	0.242	1.61	3.25	3.25	1.617	1.593	2.301	7.518	0.233	noBRIT	0.169	2.624	2
TCGA-13-1506	45	G3	IIIC	nan	0	1	1	34.14	Desert	0.094	DIF_consensus	5630.61	8109.416	7556.018	-294.422	-1516.874	991.876	7940.112	866.187	790.28	-1591.239	-1087.736	2685.352	6046.128	4483.303	4483.303	313.462	1565.78	2434.671	5404.937	1565.78	2808.073	7532.241	7091.278	5620.233	11110.036	4059.244	2562.386	1.056	1.062	0.74	2.0	2.032	4.425	3.55	1.386	4.577	1.931	0.857	1.028	0.093	1.578	TCGA-13-1506	0.021	0.058	0.02	0.062	0.001	0.014	0.0	0.005	0.019	0.0	0.799	0.088	0.164	0.127	0.097	0.051	0.464	1.683	1.102	0.74	0.093	1.056	1.931	1.931	0.857	1.462	1.505	4.425	0.511	other	0.992	0.84	0
TCGA-13-1507	77	G3	IIIC	1-10 MM	0	1	1	65.48	Infiltrated	0.166	IMR_consensus	7312.256	8039.307	8579.71	2197.835	1657.057	3380.395	6545.685	5153.61	5808.871	-621.939	3119.963	6631.263	8361.236	7827.868	7827.868	2269.742	4905.682	5634.642	8720.783	4905.682	3926.808	8506.946	7698.327	6334.133	10943.387	5645.887	6229.43	0.837	2.03	1.758	3.412	3.611	6.311	5.11	2.946	5.971	3.235	1.314	1.751	0.22	1.424	TCGA-13-1507	0.007	0.021	0.025	0.084	0.0	0.004	0.073	0.009	0.012	0.0	0.765	0.092	0.155	0.172	0.106	0.079	0.459	2.017	1.598	1.758	0.22	0.837	3.235	3.235	1.314	1.124	1.759	6.311	0.545	other	0.996	1.067	0
TCGA-13-1509	64	G3	IV	1-10 MM	1	0	0	80.1	Infiltrated	0.952	MES_consensus	5247.868	6670.944	7907.508	-110.477	1165.06	1494.557	6087.849	744.626	865.595	-2634.768	-567.56	3139.382	6209.466	4151.425	4151.425	251.837	2325.624	1842.961	4847.146	2325.624	3554.597	6559.424	5771.481	4973.432	11137.599	4209.085	6467.228	1.142	2.179	0.887	1.985	1.99	6.767	3.197	1.911	3.926	2.699	0.818	0.86	0.238	1.293	TCGA-13-1509	0.021	0.04	0.021	0.038	0.001	0.012	0.0	0.011	0.015	0.0	0.84	0.099	0.163	0.146	0.092	0.078	0.466	1.666	2.282	0.887	0.238	1.142	2.699	2.699	0.818	1.121	1.935	6.767	0.189	noBRIT	0.069	2.692	1
TCGA-13-1510	62	G3	IIIC	NO MACROSCOPIC DISEASE	1	1	1	44.65	Desert	0.834	DIF_consensus	7844.012	7587.5	7954.397	-130.864	20.123	517.332	6143.555	1255.022	1260.059	-2535.169	-499.734	3837.867	9155.549	5028.1	5028.1	200.406	3722.877	2633.35	5862.952	3722.877	3014.628	7115.517	6636.222	5706.568	11006.439	4013.692	3982.141	0.646	1.659	0.99	2.159	2.192	5.083	3.797	1.943	4.76	2.226	0.84	1.79	0.141	1.102	TCGA-13-1510	0.006	0.012	0.029	0.142	0.0	0.012	0.044	0.012	0.01	0.0	0.732	0.109	0.155	0.144	0.086	0.058	0.473	1.71	1.435	0.99	0.141	0.646	2.226	2.226	0.84	1.217	2.078	5.083	0.433	noBRIT	0.954	2.67	1
TCGA-13-1511	52	G3	IV	>20 MM	0	1	1	54.21	Desert	0.17	DIF_consensus	6051.565	8176.224	8044.32	-21.327	-2972.414	-107.95	7695.516	-797.494	467.617	-2925.693	-1939.452	2107.561	7119.522	4175.787	4175.787	505.538	1498.945	1447.241	5102.081	1498.945	4396.087	7485.711	7596.65	5642.726	10704.694	3145.384	5890.233	0.86	0.695	0.926	1.611	2.182	7.423	3.796	1.533	4.934	2.575	0.854	1.028	0.258	1.527	TCGA-13-1511	0.019	0.053	0.058	0.17	0.0	0.012	0.016	0.011	0.017	0.0	0.642	0.116	0.167	0.133	0.099	0.085	0.464	1.782	0.339	0.926	0.258	0.86	2.575	2.575	0.854	1.761	2.452	7.423	0.37	other	0.829	0.872	1
TCGA-13-1512	49	G3	IIIC	NO MACROSCOPIC DISEASE	1	0	0	14.52	Infiltrated	0.884	IMR_consensus	5650.349	7366.91	8110.736	598.557	-9.744	1103.2	6640.202	2215.678	2842.287	-2100.607	656.732	4470.504	6656.071	5903.266	5903.266	1228.138	2653.788	3636.464	6749.36	2653.788	3417.981	6587.73	6517.55	5633.282	11039.479	4638.967	5622.109	1.33	1.603	1.129	2.551	2.886	6.97	4.201	2.479	5.098	3.191	1.089	1.149	0.149	1.369	TCGA-13-1512	0.043	0.011	0.037	0.015	0.007	0.007	0.029	0.002	0.006	0.013	0.829	0.094	0.162	0.145	0.093	0.083	0.469	1.86	1.14	1.129	0.149	1.33	3.191	3.191	1.089	1.011	1.884	6.97	0.413	BRIT	0.93	2.777	1
TCGA-13-2060	51	G3	IV	1-10 MM	0	0	0	77.83	Infiltrated	0.092	IMR_consensus	7256.069	8114.003	7704.191	1361.122	1740.33	1976.231	6672.728	4225.091	5191.449	-1829.578	2022.206	6546.703	7990.349	8176.386	8176.386	1519.259	4637.789	5106.122	9062.261	4637.789	3855.826	8144.957	7621.713	6178.819	11020.066	4975.363	5442.363	1.36	2.431	1.376	3.419	3.848	6.099	5.832	3.62	6.843	3.56	1.774	1.653	0.244	1.175	TCGA-13-2060	0.014	0.039	0.06	0.0	0.025	0.011	0.0	0.011	0.026	0.0	0.813	0.099	0.17	0.17	0.1	0.087	0.474	2.279	1.675	1.376	0.244	1.36	3.56	3.56	1.774	1.265	1.69	6.099	0.443	other	0.964	0.756	0
TCGA-13-A5FT	67	G3	IIIC	NO MACROSCOPIC DISEASE	0	0	0	70.41	Desert	0.124	DIF_consensus	4562.471	7378.062	6650.128	-1728.381	-3815.109	210.982	7280.595	-2261.587	-2301.125	-3151.977	-3027.418	2091.225	4505.628	4759.982	4759.982	-133.791	1112.251	980.528	5747.704	1112.251	2338.183	7486.513	8124.495	5117.083	11123.645	2897.445	2245.527	1.379	0.511	0.467	1.04	0.963	4.864	3.918	1.541	5.097	2.166	0.985	0.492	0.23	1.35	TCGA-13-A5FT	0.013	0.034	0.057	0.0	0.017	0.013	0.0	0.003	0.019	0.06	0.783	0.098	0.176	0.117	0.091	0.054	0.458	1.589	0.322	0.467	0.23	1.379	2.166	2.166	0.985	1.322	2.056	4.864	0.321	other	0.609	0.696	1
TCGA-20-0987	61	G3	IIIC	1-10 MM	0	1	1	23.03	Infiltrated	0.158	IMR_consensus	8220.916	7763.392	7862.826	2933.721	2580.121	2170.775	7651.514	6246.579	7750.224	-795.304	4116.73	7517.806	9141.253	8025.121	8025.121	2871.205	4513.032	6239.426	8914.958	4513.032	4225.694	7987.503	6966.962	6701.637	10809.421	5713.548	3329.501	1.25	2.162	2.081	3.777	4.411	4.838	4.976	3.085	5.67	3.807	1.733	2.266	0.268	1.67	TCGA-20-0987	0.004	0.073	0.093	0.138	0.0	0.021	0.075	0.017	0.013	0.0	0.564	0.088	0.18	0.162	0.106	0.088	0.489	2.172	1.795	2.081	0.268	1.25	3.807	3.807	1.733	1.522	1.603	4.838	0.472	other	0.981	0.961	1
TCGA-20-0991	78	G3	IIB	NO MACROSCOPIC DISEASE	0	0	0	26.18	Infiltrated	0.142	IMR_consensus	8756.73	7377.51	7759.343	3654.362	5549.324	3763.667	7897.625	8146.618	8943.38	-1330.756	5684.981	8913.189	9695.624	9341.623	9341.623	3116.476	6420.864	7729.629	10167.24	6420.864	3838.008	8229.76	6740.218	6643.571	11017.601	6613.725	3245.519	1.753	3.496	1.998	4.91	5.081	4.385	6.307	4.423	7.298	4.304	1.871	1.779	0.12	2.001	TCGA-20-0991	0.021	0.05	0.11	0.054	0.021	0.009	0.0	0.028	0.031	0.0	0.676	0.093	0.193	0.158	0.112	0.076	0.506	2.924	3.219	1.998	0.12	1.753	4.304	4.304	1.871	1.176	1.678	4.385	0.576	other	0.998	1.04	1
TCGA-20-1683	65	G3	IIIC	NO MACROSCOPIC DISEASE	0	0	0	25.36	Infiltrated	0.146	PRO_consensus	4593.459	7499.644	6435.362	-162.493	-550.778	-1539.059	6222.06	-322.044	-298.93	-3962.456	-1113.322	1939.576	4852.389	2715.288	2715.288	33.664	803.082	690.781	3392.376	803.082	3378.494	6042.48	6434.429	3382.17	10856.022	3395.765	4283.948	2.057	1.784	1.083	1.881	1.887	5.585	3.072	2.361	3.989	2.836	0.878	0.734	0.402	1.745	TCGA-20-1683	0.025	0.006	0.012	0.136	0.0	0.017	0.0	0.011	0.017	0.0	0.775	0.107	0.171	0.15	0.09	0.095	0.461	1.523	1.032	1.083	0.402	2.057	2.836	2.836	0.878	1.626	2.331	5.585	0.276	other	0.356	0.701	1
TCGA-20-1686	75	G3	IIIC	NO MACROSCOPIC DISEASE	0	0	0	2.92	Desert	0.192	DIF_consensus	4014.312	8162.503	7634.18	-1014.694	-2743.578	1056.996	5560.036	-1479.1	-1204.867	-2448.972	-2424.599	1656.049	4128.894	3273.561	3273.561	71.554	681.429	291.137	4004.342	681.429	3000.326	6058.896	6209.83	4005.73	11015.524	3709.864	4326.975	1.088	0.538	0.629	0.946	1.044	5.104	2.588	1.131	3.217	1.686	1.219	1.187	0.147	0.923	TCGA-20-1686	0.01	0.006	0.023	0.0	0.016	0.007	0.002	0.002	0.009	0.009	0.917	0.102	0.147	0.14	0.084	0.063	0.442	1.34	0.33	0.629	0.147	1.088	1.686	1.686	1.219	1.077	2.342	5.104	0.168	other	0.044	0.694	1
TCGA-20-1687	46	G3	IV	NO MACROSCOPIC DISEASE	1	0	0	2.66	Infiltrated	0.802	DIF_consensus	7509.656	7487.535	7218.642	643.815	-832.913	1353.856	6527.399	67.818	923.653	-1987.328	-687.754	3891.318	8683.198	5262.722	5262.722	977.476	3845.006	2422.555	6152.536	3845.006	4062.264	7433.487	6608.772	5078.303	10966.08	3877.959	5251.136	1.091	1.129	0.801	1.511	1.882	6.236	3.845	1.871	4.898	2.629	1.231	0.768	0.117	1.501	TCGA-20-1687	0.011	0.0	0.039	0.149	0.0	0.009	0.054	0.01	0.009	0.0	0.718	0.106	0.165	0.147	0.094	0.076	0.475	1.515	0.72	0.801	0.117	1.091	2.629	2.629	1.231	1.451	2.02	6.236	0.203	noBRIT	0.093	2.319	1
TCGA-23-1021	45	G3	IV	>20 MM	1	1	1	47.51	Desert	0.79	DIF_consensus	6782.867	7895.01	7129.896	-668.031	-1570.96	-657.795	6352.673	-620.974	-605.284	-2221.621	-1484.179	1872.714	8117.925	2998.732	2998.732	155.971	2243.789	1404.323	3751.315	2243.789	2991.979	7399.734	7029.414	5383.206	11042.613	3245.787	4086.101	1.008	0.785	0.797	1.122	1.124	5.311	2.634	0.742	3.558	1.758	0.583	1.578	0.084	0.955	TCGA-23-1021	0.015	0.004	0.015	0.106	0.0	0.018	0.022	0.008	0.008	0.0	0.803	0.104	0.16	0.122	0.08	0.048	0.456	1.426	0.512	0.797	0.084	1.008	1.758	1.758	0.583	1.123	1.555	5.311	0.232	noBRIT	0.168	2.322	0
TCGA-23-1022	67	G3	IIIC	1-10 MM	1	1	1	49.64	Desert	0.812	DIF_consensus	2877.185	8115.729	8256.583	-1668.226	-6005.337	-1316.795	6600.285	-3794.123	-2982.539	-2911.241	-4137.531	-429.138	2920.329	933.771	933.771	-696.079	-1531.875	-1151.252	1524.286	-1531.875	2188.935	4776.277	4035.554	3110.606	11106.197	2451.265	2829.485	0.42	0.024	0.136	0.209	0.245	5.123	1.568	0.569	2.429	1.159	0.53	0.189	0.029	0.592	TCGA-23-1022	0.059	0.0	0.015	0.0	0.025	0.007	0.0	0.0	0.0	0.008	0.885	0.1	0.151	0.104	0.069	0.053	0.433	1.331	0.0	0.136	0.029	0.42	1.159	1.159	0.53	0.77	1.605	5.123	0.066	noBRIT	0.004	2.186	0
TCGA-23-1027	48	G3	IIIC	1-10 MM	1	1	1	32.07	Infiltrated	0.94	DIF_consensus	7011.77	7364.084	8269.07	556.527	-1728.086	1816.309	7731.06	-423.494	630.986	-1225.291	-1562.652	3166.807	7727.273	4620.247	4620.247	987.709	2879.96	1643.515	5496.405	2879.96	4291.863	7351.075	6624.247	5222.45	11164.353	4138.437	6114.293	1.008	0.75	0.43	1.247	1.665	6.956	3.479	1.222	4.305	3.11	1.397	0.45	0.056	1.329	TCGA-23-1027	0.011	0.058	0.024	0.124	0.0	0.014	0.005	0.007	0.019	0.0	0.738	0.095	0.181	0.104	0.102	0.065	0.473	1.256	0.471	0.43	0.056	1.008	3.11	3.11	1.397	1.135	1.955	6.956	0.164	noBRIT	0.04	2.632	1
TCGA-23-1029	46	G3	IIIC	1-10 MM	1	0	0	8.8	Infiltrated	0.876	DIF_consensus	5974.589	7287.542	8204.557	-199.524	-3548.909	-227.543	6877.356	-2689.351	-2397.453	-3291.574	-4072.65	1903.408	6180.175	4793.77	4793.77	60.92	1891.964	569.064	5790.26	1891.964	3376.251	8938.781	8474.741	5482.189	11009.167	2685.326	3773.203	1.594	0.75	0.384	0.988	1.04	6.252	4.11	2.09	5.219	3.025	0.565	0.286	0.101	1.554	TCGA-23-1029	0.023	0.004	0.066	0.0	0.042	0.012	0.001	0.001	0.013	0.033	0.804	0.103	0.182	0.116	0.101	0.081	0.461	1.339	0.222	0.384	0.101	1.594	3.025	3.025	0.565	1.572	2.623	6.252	0.163	noBRIT	0.039	2.464	1
TCGA-23-1030	64	G3	IIIC	1-10 MM	0	0	0	29.11	Infiltrated	0.03	DIF_consensus	5933.496	8903.4	6849.312	275.724	-1831.447	1742.141	8119.221	349.898	314.468	-1301.023	-823.758	2939.318	6252.118	4358.874	4358.874	420.575	1849.388	2164.712	5205.406	1849.388	2944.309	8059.86	7579.933	5950.559	11071.287	3814.714	4792.881	0.978	0.913	0.807	1.751	1.777	5.953	3.468	1.813	4.369	2.938	1.193	1.311	0.122	1.373	TCGA-23-1030	0.063	0.01	0.03	0.107	0.0	0.009	0.0	0.003	0.014	0.0	0.763	0.087	0.168	0.129	0.094	0.064	0.469	1.508	0.638	0.807	0.122	0.978	2.938	2.938	1.193	1.468	2.304	5.953	0.373	other	0.84	0.513	0
TCGA-23-1110	42	G3	IIIC	NO MACROSCOPIC DISEASE	0	0	0	54.47	Desert	0.158	PRO_consensus	1089.349	8189.637	6865.69	-1649.837	-4443.987	-3251.88	5378.292	-4242.547	-3215.661	-3653.346	-4697.163	-2620.763	100.055	-1371.771	-1371.771	-1520.128	-3630.632	-2816.726	-953.175	-3630.632	1683.985	4537.694	4883.554	3324.45	11204.222	1518.375	3334.606	1.122	0.284	0.163	0.368	0.636	5.449	1.304	0.766	1.837	1.492	0.626	0.353	0.113	1.571	TCGA-23-1110	0.027	0.002	0.008	0.026	0.019	0.019	0.0	0.001	0.014	0.0	0.883	0.087	0.157	0.106	0.079	0.065	0.425	1.176	0.195	0.163	0.113	1.122	1.492	1.492	0.626	1.18	2.309	5.449	0.037	other	0.002	0.453	1
TCGA-23-1111	63	G3	IIIC	>20 MM	0	0	0	3.22	Desert	0.028	DIF_consensus	3874.305	8863.852	6290.092	-1307.657	-2453.134	-1228.594	6427.166	-1942.497	-2280.889	-3349.68	-3403.247	497.04	3756.604	2625.685	2625.685	-454.091	-1105.996	465.347	3359.69	-1105.996	3212.275	7388.43	6978.445	4514.876	11029.892	2841.922	4429.292	0.985	0.807	0.348	0.994	0.847	5.895	2.733	0.825	3.792	1.575	0.642	0.885	0.154	1.162	TCGA-23-1111	0.05	0.003	0.033	0.095	0.0	0.014	0.0	0.003	0.012	0.0	0.79	0.087	0.154	0.142	0.084	0.073	0.445	1.52	1.081	0.348	0.154	0.985	1.575	1.575	0.642	1.469	2.088	5.895	0.224	other	0.143	0.334	1
TCGA-23-1113	48	G3	IV	1-10 MM	0	1	1	31.18	Desert	0.102	DIF_consensus	3789.998	8780.002	6479.963	-1071.406	-4297.923	-1920.51	7299.465	-3821.8	-3078.856	-2459.504	-4078.923	-1248.732	4191.035	11.83	11.83	-508.911	-1274.651	-1841.623	528.381	-1274.651	3377.729	5394.531	4262.441	4129.822	11176.278	2709.126	5430.993	0.831	0.188	0.302	0.262	0.387	6.37	1.412	0.296	2.104	1.907	0.705	0.979	0.068	0.959	TCGA-23-1113	0.089	0.003	0.038	0.05	0.0	0.007	0.0	0.0	0.0	0.0	0.812	0.089	0.156	0.107	0.082	0.056	0.449	1.303	0.085	0.302	0.068	0.831	1.907	1.907	0.705	1.042	1.466	6.37	0.036	other	0.002	0.307	0
TCGA-23-1114	55	G3	IIIC	NO MACROSCOPIC DISEASE	1	1	1	68.63	Desert	0.806	PRO_consensus	1895.413	7004.172	6555.132	-1685.24	-6638.091	-21.674	6409.54	-5263.098	-3876.785	-2401.434	-5529.04	-1570.948	1399.478	-261.403	-261.403	-1330.243	-1518.759	-2329.539	328.779	-1518.759	3519.409	4873.754	5323.485	3632.812	10966.226	2502.532	4727.595	1.051	0.17	0.25	0.399	0.69	6.759	2.045	1.164	2.799	2.75	1.016	0.261	0.219	2.037	TCGA-23-1114	0.031	0.053	0.041	0.025	0.005	0.023	0.0	0.0	0.02	0.0	0.803	0.091	0.179	0.103	0.094	0.081	0.455	1.487	0.032	0.25	0.219	1.051	2.75	2.75	1.016	1.655	2.775	6.759	0.069	noBRIT	0.005	2.174	3
TCGA-23-1116	83	G3	IIIC	>20 MM	1	1	1	19.45	Infiltrated	0.792	MES_consensus	6189.559	8019.331	7593.226	969.976	-2073.062	3843.324	7808.398	1525.204	2857.057	-519.888	70.442	4422.029	7291.892	5854.653	5854.653	1877.805	2409.611	3263.194	6711.196	2409.611	4668.526	7580.094	7430.853	5296.984	11043.783	4825.44	7925.358	1.171	0.873	0.982	2.173	2.755	8.136	4.09	2.263	4.948	3.942	2.494	1.154	0.272	1.621	TCGA-23-1116	0.007	0.044	0.051	0.0	0.032	0.013	0.046	0.001	0.01	0.005	0.79	0.089	0.176	0.134	0.122	0.085	0.478	1.857	0.545	0.982	0.272	1.171	3.942	3.942	2.494	2.557	2.417	8.136	0.36	noBRIT	0.794	2.476	2
TCGA-23-1118	45	G3	IIIC	>20 MM	1	0	0	85.95	Infiltrated	0.868	IMR_consensus	7120.57	7426.402	7403.167	596.299	-403.091	2211.305	7300.728	964.436	1205.151	-2548.159	-441.66	4378.144	8026.179	6313.354	6313.354	897.802	3631.815	3117.781	7224.515	3631.815	3248.703	7635.061	6910.643	5679.554	11210.165	4111.017	4268.272	0.829	1.556	0.983	2.1	2.207	5.836	4.437	2.333	5.514	3.35	1.12	1.216	0.149	1.147	TCGA-23-1118	0.017	0.03	0.034	0.074	0.0	0.009	0.0	0.009	0.016	0.0	0.81	0.101	0.166	0.133	0.099	0.074	0.472	1.883	0.943	0.983	0.149	0.829	3.35	3.35	1.12	1.366	1.928	5.836	0.296	BRIT	0.468	2.599	0
TCGA-23-1122	53	G3	IIIC	1-10 MM	1	1	1	39.06	Infiltrated	0.9	PRO_consensus	5351.927	7539.301	7622.238	-686.797	-4195.054	892.008	5994.28	-2433.88	-1200.217	-2990.345	-3056.159	1862.803	5651.012	4096.995	4096.995	36.661	1519.929	935.208	4963.294	1519.929	3792.677	7711.18	7170.814	5551.767	11049.658	3014.897	4696.491	0.977	0.544	0.696	1.108	1.554	6.31	3.692	2.066	4.704	3.233	1.322	1.259	0.172	1.666	TCGA-23-1122	0.022	0.0	0.067	0.055	0.0	0.017	0.0	0.003	0.017	0.0	0.818	0.096	0.175	0.122	0.098	0.085	0.465	1.735	0.206	0.696	0.172	0.977	3.233	3.233	1.322	1.383	2.336	6.31	0.171	noBRIT	0.047	2.536	2
TCGA-23-1123	59	G3	IIIC	11-20 MM	0	1	1	33.45	Infiltrated	0.072	IMR_consensus	6253.672	7405.762	5965.878	1648.484	1980.416	903.451	7023.857	3825.692	4615.173	-2226.099	2529.043	6656.221	7056.351	7526.755	7526.755	1569.769	3779.772	4830.085	8429.929	3779.772	3161.271	9071.359	7733.098	6112.339	10896.642	4904.98	2871.98	2.298	2.958	1.922	3.709	4.076	5.005	5.626	3.709	6.352	4.336	1.245	1.876	0.406	2.421	TCGA-23-1123	0.017	0.027	0.123	0.0	0.024	0.026	0.007	0.019	0.033	0.0	0.724	0.099	0.186	0.171	0.108	0.096	0.479	2.8	2.054	1.922	0.406	2.298	4.336	4.336	1.245	1.778	2.241	5.005	0.424	other	0.944	0.681	1
TCGA-23-1809	63	G3	IIC	1-10 MM	1	0	0	0.53	Desert	0.788	PRO_consensus	3596.617	7330.775	6231.269	-1443.785	-2915.005	-627.009	6706.978	-2313.241	-2067.347	-3177.648	-3245.87	427.048	3289.926	1824.759	1824.759	-620.112	-389.69	2.06	2607.493	-389.69	3298.447	6502.336	6246.746	4235.439	10886.394	2431.561	4416.691	1.092	0.939	0.642	1.17	1.258	5.834	2.941	1.719	3.851	2.996	1.033	0.746	0.117	2.444	TCGA-23-1809	0.016	0.0	0.032	0.064	0.099	0.022	0.0	0.004	0.012	0.0	0.751	0.091	0.168	0.129	0.091	0.086	0.472	1.805	0.617	0.642	0.117	1.092	2.996	2.996	1.033	1.775	2.631	5.834	0.214	noBRIT	0.118	2.296	1
TCGA-23-2077	45	G3	IIIC	NO MACROSCOPIC DISEASE	1	0	0	115.81	Infiltrated	0.846	IMR_consensus	6868.348	7654.159	7540.636	396.053	-1464.982	325.384	6449.826	-815.749	-571.037	-2525.794	-1620.845	3524.717	8077.979	4815.46	4815.46	463.579	3025.331	1433.929	5699.172	3025.331	3310.995	6910.435	6874.258	5331.46	11055.946	3806.561	4041.545	1.629	1.303	0.846	1.588	1.698	6.016	4.047	2.091	4.901	3.738	1.429	1.005	0.115	1.881	TCGA-23-2077	0.019	0.016	0.069	0.049	0.034	0.016	0.029	0.004	0.014	0.0	0.75	0.099	0.18	0.131	0.099	0.092	0.47	1.863	0.906	0.846	0.115	1.629	3.738	3.738	1.429	1.516	2.356	6.016	0.201	BRIT	0.09	2.431	2
TCGA-23-2078	66	G3	IIIC	NO MACROSCOPIC DISEASE	1	0	0	87.43	Excluded	0.828	MES_consensus	4803.642	7495.529	7193.118	681.128	1340.074	1077.578	6692.383	3008.915	3400.739	-3031.404	1690.515	5356.195	5796.505	5873.363	5873.363	1339.412	2945.484	3360.559	6772.56	2945.484	4183.234	6417.019	6145.189	4651.162	11052.812	4267.167	7283.672	2.805	2.77	1.682	3.417	3.619	8.036	4.458	3.014	5.101	3.36	1.505	1.486	0.354	2.822	TCGA-23-2078	0.025	0.009	0.057	0.0	0.007	0.011	0.091	0.01	0.016	0.041	0.733	0.098	0.204	0.161	0.1	0.095	0.468	3.021	2.055	1.682	0.354	2.805	3.36	3.36	1.505	1.638	2.783	8.036	0.475	noBRIT	0.982	2.703	3
TCGA-23-2084	45	G3	IV	NO MACROSCOPIC DISEASE	1	1	1	49.81	Infiltrated	0.934	IMR_consensus	6561.555	6952.398	7611.697	484.802	-1990.443	-585.37	7187.452	-57.101	770.803	-2168.965	-1160.556	3286.998	6844.953	5202.739	5202.739	1116.702	1996.66	2359.771	6113.613	1996.66	4545.967	8718.151	7892.889	6031.963	11146.138	3325.649	4996.297	1.12	0.84	0.772	1.733	2.142	6.78	4.075	2.05	5.038	3.224	0.509	1.102	0.186	1.438	TCGA-23-2084	0.015	0.024	0.05	0.089	0.0	0.022	0.005	0.006	0.017	0.0	0.773	0.1	0.181	0.133	0.102	0.089	0.472	1.754	0.48	0.772	0.186	1.12	3.224	3.224	0.509	1.177	2.287	6.78	0.292	BRIT	0.446	2.766	1
TCGA-24-0970	63	G3	IIIC	>20 MM	0	1	1	11.63	Desert	0.074	MES_consensus	4221.917	7697.887	6004.437	-645.912	-3400.945	-1251.86	7523.484	-2535.291	-1899.33	-3130.987	-3531.291	-33.983	4485.66	1228.177	1228.177	-5.771	-292.311	-529.67	1940.714	-292.311	3509.524	5991.635	5005.645	4015.752	11127.095	3261.04	6932.687	1.038	0.49	0.297	0.758	0.966	7.439	2.171	0.754	3.004	2.688	0.497	0.673	0.216	1.464	TCGA-24-0970	0.048	0.042	0.022	0.005	0.012	0.01	0.0	0.0	0.009	0.016	0.837	0.096	0.179	0.108	0.093	0.083	0.455	1.533	0.464	0.297	0.216	1.038	2.688	2.688	0.497	1.273	1.944	7.439	0.128	other	0.018	0.341	1
TCGA-24-0979	53	G3	IV	>20 MM	1	1	1	41.53	Desert	0.736	DIF_consensus	6892.109	8204.483	6955.222	-102.525	-751.853	-359.271	7060.556	114.927	733.375	-2668.905	-1426.367	2853.2	7997.789	5096.813	5096.813	-102.756	3251.699	2151.441	5905.899	3251.699	3093.577	7581.104	6224.503	5985.403	11153.494	3075.057	2993.429	1.136	1.426	0.799	1.772	2.023	5.174	3.867	1.7	4.906	1.823	0.876	0.808	0.194	1.196	TCGA-24-0979	0.014	0.008	0.029	0.0	0.036	0.009	0.016	0.003	0.006	0.01	0.871	0.096	0.153	0.145	0.086	0.059	0.465	1.527	0.929	0.799	0.194	1.136	1.823	1.823	0.876	1.189	2.156	5.174	0.281	noBRIT	0.387	2.239	1
TCGA-24-0982	77	G3	IIIC	1-10 MM	0	1	1	22.31	Desert	0.092	PRO_consensus	4894.372	8206.925	6886.748	-470.986	-2057.482	209.967	6217.65	-1015.838	-749.849	-3230.271	-2217.076	2031.27	5452.755	3481.158	3481.158	-266.53	1384.009	770.112	4297.132	1384.009	2721.855	6887.88	6629.679	5190.718	11153.209	3244.161	5142.655	1.308	1.002	0.597	1.409	1.518	6.68	3.081	1.796	3.862	1.776	0.886	0.992	0.283	1.472	TCGA-24-0982	0.024	0.096	0.024	0.02	0.022	0.014	0.0	0.002	0.022	0.0	0.775	0.094	0.171	0.129	0.087	0.066	0.445	1.484	0.794	0.597	0.283	1.308	1.776	1.776	0.886	1.001	2.221	6.68	0.26	other	0.278	0.542	1
TCGA-24-1103	50	G3	IIIC	1-10 MM	1	1	1	54.08	Desert	0.87	DIF_consensus	4735.785	6640.193	8265.585	-896.333	-1942.133	-329.915	6049.631	-151.67	674.198	-3118.872	-1857.371	1957.425	4795.504	4086.838	4086.838	29.308	979.313	1455.365	4933.584	979.313	2730.37	7308.941	6444.437	4655.894	10947.571	2753.814	2584.184	0.491	0.881	0.545	1.571	1.89	4.457	3.313	1.093	4.372	1.8	0.306	0.647	0.113	0.84	TCGA-24-1103	0.013	0.0	0.019	0.095	0.0	0.01	0.019	0.007	0.011	0.0	0.825	0.09	0.151	0.138	0.082	0.051	0.465	1.39	0.346	0.545	0.113	0.491	1.8	1.8	0.306	1.323	2.056	4.457	0.36	noBRIT	0.794	2.679	1
TCGA-24-1104	56	G3	IV	>20 MM	1	1	1	63.51	Infiltrated	0.934	DIF_consensus	6192.031	6841.933	7892.771	845.952	1842.726	887.769	6431.856	2950.977	3918.419	-1746.306	1799.851	5093.073	7312.285	6077.946	6077.946	1136.702	3237.202	3894.743	6931.998	3237.202	4087.964	7169.845	6308.468	6038.797	10794.177	3992.743	3714.391	1.25	2.512	1.848	2.952	3.33	6.228	4.283	2.134	5.119	2.985	0.996	2.151	0.465	1.528	TCGA-24-1104	0.013	0.013	0.054	0.095	0.0	0.012	0.025	0.016	0.023	0.0	0.75	0.098	0.174	0.169	0.098	0.083	0.474	2.331	2.051	1.848	0.465	1.25	2.985	2.985	0.996	1.648	2.205	6.228	0.362	noBRIT	0.801	2.847	1
TCGA-24-1413	51	G3	IIIC	1-10 MM	0	0	0	6.31	Infiltrated	0.086	DIF_consensus	7063.218	8001.297	6960.682	-338.253	-3135.303	-338.954	7260.1	-646.521	358.507	-2899.26	-2163.094	2854.286	7907.223	5502.529	5502.529	240.622	2597.117	1726.832	6456.757	2597.117	3212.532	8910.166	8081.031	5883.906	10869.155	3317.935	2368.74	1.219	0.724	0.573	1.698	2.122	4.896	4.258	2.004	5.198	2.77	0.676	1.015	0.211	1.486	TCGA-24-1413	0.02	0.006	0.03	0.125	0.0	0.015	0.029	0.007	0.013	0.0	0.754	0.104	0.155	0.142	0.098	0.074	0.468	1.281	0.327	0.573	0.211	1.219	2.77	2.77	0.676	1.56	2.357	4.896	0.336	other	0.689	0.615	1
TCGA-24-1416	34	G3	IV	1-10 MM	0	0	0	6.37	Desert	0.07	DIF_consensus	5268.585	8433.091	6071.548	31.775	-3203.751	100.295	6005.618	-1712.067	-232.223	-1974.424	-2188.061	1514.416	6209.504	3110.151	3110.151	125.28	691.424	862.424	3894.58	691.424	2645.255	7301.792	7337.526	5412.057	11017.481	3119.18	2783.912	1.141	0.64	0.808	1.214	1.835	4.783	3.039	1.357	3.962	2.574	1.141	1.25	0.224	1.323	TCGA-24-1416	0.015	0.017	0.055	0.012	0.024	0.014	0.0	0.002	0.01	0.0	0.851	0.094	0.162	0.142	0.094	0.074	0.471	1.506	0.404	0.808	0.224	1.141	2.574	2.574	1.141	1.7	1.904	4.783	0.181	other	0.058	0.392	1
TCGA-24-1417	54	G3	IV	1-10 MM	1	0	0	7.82	Infiltrated	0.884	IMR_consensus	7304.363	7095.471	7500.252	1969.988	1459.204	2077.961	7316.987	3812.642	5023.213	-2094.1	2228.56	6190.224	7808.308	7592.252	7592.252	2203.96	4234.172	4848.925	8592.691	4234.172	4831.617	9258.912	8226.865	6593.83	11003.736	4723.035	5899.538	1.344	2.759	2.111	3.704	4.243	7.521	5.619	3.374	6.26	4.488	1.215	2.159	0.464	2.223	TCGA-24-1417	0.049	0.044	0.069	0.041	0.01	0.02	0.0	0.012	0.027	0.019	0.709	0.088	0.193	0.167	0.115	0.095	0.489	2.47	2.026	2.111	0.464	1.344	4.488	4.488	1.215	1.689	2.748	7.521	0.472	BRIT	0.981	2.846	2
TCGA-24-1418	68	G3	IIIC	>20 MM	0	0	0	7.98	Infiltrated	0.084	MES_consensus	4984.411	7835.363	6698.977	-293.899	-1521.897	956.82	6837.408	-356.293	-282.834	-2330.191	-1583.523	2543.732	5765.839	4038.72	4038.72	94.298	1564.873	1103.919	4961.847	1564.873	3896.272	6736.817	7080.449	4267.785	11041.781	3467.228	6435.348	1.902	1.357	0.887	1.864	1.905	7.403	3.653	1.777	4.535	2.942	0.907	1.168	0.145	1.607	TCGA-24-1418	0.035	0.024	0.029	0.086	0.0	0.009	0.04	0.005	0.008	0.0	0.764	0.089	0.176	0.141	0.099	0.085	0.466	2.031	0.899	0.887	0.145	1.902	2.942	2.942	0.907	1.553	2.587	7.403	0.323	other	0.624	0.595	1
TCGA-24-1419	62	G3	IIIC	11-20 MM	0	0	0	7.85	Desert	0.166	PRO_consensus	4044.009	7158.807	6586.443	-1980.354	-5354.804	-2302.907	6794.528	-4375.441	-2474.783	-3214.445	-5449.126	-938.579	3952.077	1362.761	1362.761	-1068.972	-1108.538	-1793.219	2016.713	-1108.538	2369.427	7307.067	6764.994	4401.893	11035.151	1948.409	2243.997	1.201	0.17	0.11	0.454	0.966	5.081	2.342	0.586	3.229	1.969	0.489	0.092	0.061	1.115	TCGA-24-1419	0.011	0.009	0.086	0.0	0.03	0.014	0.0	0.001	0.013	0.003	0.833	0.098	0.158	0.127	0.08	0.075	0.447	0.606	0.0	0.11	0.061	1.201	1.969	1.969	0.489	1.414	2.08	5.081	0.182	other	0.06	0.644	1
TCGA-24-1422	82	G3	IIIC	1-10 MM	1	1	1	0.76	Infiltrated	0.754	MES_consensus	6423.413	8140.744	6838.189	976.617	-207.976	1315.2	6887.874	3576.813	5263.939	-2181.118	2134.717	4124.985	7437.745	4871.193	4871.193	925.076	2996.253	3245.258	5710.501	2996.253	5404.602	6945.054	5938.134	5361.207	10968.255	4235.782	7749.794	1.157	2.062	2.406	3.486	4.235	8.137	4.123	1.991	4.605	4.03	1.655	2.705	0.599	1.963	TCGA-24-1422	0.022	0.048	0.095	0.027	0.015	0.022	0.0	0.009	0.024	0.0	0.739	0.093	0.169	0.191	0.106	0.107	0.481	2.382	1.421	2.406	0.599	1.157	4.03	4.03	1.655	1.796	2.846	8.137	0.547	noBRIT	0.997	2.596	2
TCGA-24-1423	61	G3	IIIC	1-10 MM	1	0	0	6.24	Desert	0.886	DIF_consensus	6765.096	7539.185	7745.739	-35.048	-1790.608	780.714	6789.926	11.105	224.086	-3282.694	-1407.273	3621.514	7560.429	5573.473	5573.473	304.817	3200.293	2181.269	6469.376	3200.293	3976.224	8465.581	7335.636	5556.711	10818.951	3527.724	4508.379	1.04	1.297	0.872	2.059	2.187	6.218	4.437	2.471	5.446	2.979	1.258	1.344	0.168	1.488	TCGA-24-1423	0.017	0.017	0.065	0.0	0.033	0.009	0.002	0.003	0.023	0.021	0.81	0.108	0.17	0.138	0.095	0.084	0.468	1.813	0.804	0.872	0.168	1.04	2.979	2.979	1.258	1.883	2.676	6.218	0.414	noBRIT	0.931	2.783	1
TCGA-24-1424	67	G3	IIIC	1-10 MM	0	0	0	6.01	Infiltrated	0.2	PRO_consensus	4503.051	7330.378	6645.934	-552.41	-1886.888	354.181	6252.32	-634.148	-491.798	-2924.031	-2063.91	2330.046	4913.915	4015.472	4015.472	9.562	929.46	1104.938	4763.455	929.46	3426.122	7701.195	7435.839	4360.171	10975.065	3241.097	5419.955	1.289	1.331	0.772	1.897	1.976	6.783	3.774	2.516	4.696	3.535	1.267	0.862	0.188	1.697	TCGA-24-1424	0.017	0.015	0.066	0.0	0.018	0.022	0.0	0.006	0.018	0.025	0.814	0.089	0.175	0.129	0.103	0.092	0.46	1.673	0.665	0.772	0.188	1.289	3.535	3.535	1.267	1.66	2.996	6.783	0.302	other	0.504	0.871	2
TCGA-24-1425	45	G3	IIIC	1-10 MM	1	0	0	5.95	Infiltrated	0.87	MES_consensus	6436.203	7286.467	7533.33	609.014	-1775.855	1366.139	6803.141	394.321	1663.156	-2582.159	-768.604	3643.738	7390.608	5218.717	5218.717	738.478	2880.45	2413.974	6165.179	2880.45	5316.785	6997.493	6965.442	4715.688	10935.436	3929.237	8139.921	1.729	1.591	1.704	2.542	3.148	8.755	4.399	2.235	5.306	4.273	1.289	1.586	0.442	2.065	TCGA-24-1425	0.015	0.044	0.092	0.0	0.048	0.02	0.022	0.006	0.021	0.0	0.731	0.089	0.192	0.15	0.109	0.1	0.489	1.867	0.886	1.704	0.442	1.729	4.273	4.273	1.289	2.116	3.95	8.755	0.378	noBRIT	0.855	2.7	3
TCGA-24-1426	43	G3	IIIC	1-10 MM	0	0	0	5.36	Desert	0.046	PRO_consensus	3976.232	8534.144	5640.425	-481.823	-4188.525	-1681.776	6702.119	-4349.889	-4233.186	-3574.742	-4967.123	-908.418	4590.035	986.393	986.393	-836.596	-867.122	-1409.539	1637.181	-867.122	2651.271	6759.172	6531.928	3981.001	10997.633	2514.568	3583.648	0.968	0.425	0.258	0.386	0.403	5.155	2.144	0.76	3.145	2.862	0.723	0.694	0.182	1.428	TCGA-24-1426	0.091	0.002	0.094	0.0	0.017	0.007	0.0	0.0	0.003	0.0	0.786	0.091	0.177	0.103	0.089	0.083	0.447	1.576	0.289	0.258	0.182	0.968	2.862	2.862	0.723	1.331	1.857	5.155	0.041	other	0.002	0.167	1
TCGA-24-1427	58	G3	IIIC	>20 MM	1	0	0	4.83	Infiltrated	0.868	MES_consensus	5766.157	6816.01	7265.268	1020.8	2127.24	751.995	6970.246	2047.129	2357.773	-2647.277	533.214	3798.07	6973.78	4000.452	4000.452	973.795	3089.861	2298.397	4749.478	3089.861	4958.091	5982.373	5765.568	5006.41	10925.26	4022.487	7236.969	1.647	2.93	1.34	2.9	3.018	7.996	3.605	2.254	4.239	3.607	1.384	0.831	0.218	2.09	TCGA-24-1427	0.019	0.064	0.058	0.048	0.0	0.016	0.0	0.02	0.032	0.0	0.744	0.086	0.189	0.154	0.105	0.092	0.487	2.22	2.356	1.34	0.218	1.647	3.607	3.607	1.384	1.731	2.708	7.996	0.323	noBRIT	0.624	2.631	3
TCGA-24-1428	50	G3	IIIC	1-10 MM	1	0	0	17.38	Infiltrated	0.918	IMR_consensus	6917.686	6934.211	8456.662	1036.019	-599.931	2484.072	8085.491	2190.201	4063.273	-1809.585	1053.033	5569.729	7845.789	7372.7	7372.7	1592.766	3974.607	4187.95	8365.519	3974.607	4590.4	7860.126	7040.184	6276.64	11094.862	4373.124	3375.517	1.468	1.496	1.259	2.641	3.466	5.592	5.237	2.726	5.999	4.124	1.04	1.527	0.339	1.647	TCGA-24-1428	0.034	0.031	0.049	0.016	0.009	0.016	0.0	0.002	0.02	0.003	0.82	0.092	0.182	0.135	0.104	0.082	0.486	2.308	1.045	1.259	0.339	1.468	4.124	4.124	1.04	1.284	1.961	5.592	0.389	BRIT	0.883	2.837	0
TCGA-24-1430	68	G3	IIIC	>20 MM	1	1	1	28.35	Desert	0.774	PRO_consensus	3531.522	7506.206	7018.141	-1747.416	-3172.716	-1074.437	6083.178	-3408.111	-3448.373	-3464.404	-4508.516	-1245.291	3803.479	-64.124	-64.124	-1306.476	-1069.457	-2224.503	568.636	-1069.457	2605.204	4778.372	3858.119	3259.16	10959.376	2272.727	4088.694	1.187	0.773	0.342	0.693	0.681	6.089	1.933	0.722	2.79	2.494	0.703	0.828	0.141	1.421	TCGA-24-1430	0.088	0.0	0.046	0.081	0.0	0.014	0.0	0.0	0.007	0.0	0.765	0.097	0.165	0.12	0.083	0.075	0.447	0.921	0.581	0.342	0.141	1.187	2.494	2.494	0.703	1.661	2.754	6.089	0.104	noBRIT	0.01	2.132	2
TCGA-24-1431	67	G3	IIIC	1-10 MM	0	1	1	18.63	Infiltrated	0.1	DIF_consensus	5819.499	8202.15	7229.638	486.171	-658.401	-418.571	6810.109	397.766	1548.97	-2441.408	-379.841	2590.756	6670.93	4018.52	4018.52	360.098	2175.336	1795.892	4769.104	2175.336	3626.965	6518.481	5778.673	5286.617	11155.251	3327.427	4049.084	0.752	0.894	0.788	1.318	1.817	5.341	2.9	1.133	3.782	2.483	0.524	1.126	0.168	0.904	TCGA-24-1431	0.016	0.006	0.035	0.011	0.01	0.012	0.004	0.002	0.005	0.003	0.896	0.102	0.155	0.137	0.084	0.075	0.45	1.17	0.513	0.788	0.168	0.752	2.483	2.483	0.524	1.129	1.302	5.341	0.182	other	0.059	0.471	1
TCGA-24-1434	59	G3	IIIC	1-10 MM	0	1	1	18.66	Infiltrated	0.12	MES_consensus	6459.127	7299.526	7394.812	1544.073	-1844.71	2590.507	7204.981	-331.184	932.984	-1006.551	-1199.002	3728.664	7610.868	5277.317	5277.317	1422.9	3467.326	2143.797	6078.146	3467.326	5253.966	6545.959	6485.885	4439.215	10762.349	4588.973	8650.624	1.064	1.143	0.886	1.841	2.451	8.536	4.259	2.695	5.261	4.46	1.052	1.042	0.258	1.737	TCGA-24-1434	0.024	0.082	0.094	0.015	0.028	0.012	0.0	0.003	0.027	0.0	0.715	0.09	0.185	0.141	0.117	0.104	0.493	2.028	0.737	0.886	0.258	1.064	4.46	4.46	1.052	1.711	2.599	8.536	0.237	other	0.184	0.588	2
TCGA-24-1435	57	G3	IIIC	1-10 MM	1	1	1	43.5	Infiltrated	0.954	MES_consensus	7356.069	6936.029	7825.146	364.028	105.432	1786.484	7428.601	1283.516	1800.257	-2217.662	-253.209	4266.252	8236.984	6417.775	6417.775	1027.712	3901.988	3330.29	7414.267	3901.988	4872.984	7945.928	7718.145	5485.592	10940.827	3916.57	7208.997	0.769	1.988	1.081	2.527	2.768	8.399	4.826	2.561	5.892	3.984	2.17	1.009	0.19	1.79	TCGA-24-1435	0.012	0.043	0.068	0.134	0.0	0.012	0.006	0.014	0.018	0.0	0.692	0.104	0.178	0.142	0.104	0.093	0.489	1.85	1.54	1.081	0.19	0.769	3.984	3.984	2.17	1.464	2.582	8.399	0.347	noBRIT	0.742	2.882	2
TCGA-24-1464	70	G3	IIIC	>20 MM	0	1	1	12.45	Infiltrated	0.192	IMR_consensus	6117.274	7204.78	7684.47	1323.077	3224.216	-273.24	6585.217	4174.367	4775.297	-2612.903	2064.307	5086.701	6851.074	5760.951	5760.951	799.459	3098.248	3760.958	6469.146	3098.248	2863.166	7364.97	6858.571	6096.336	11180.515	4423.417	3215.544	0.839	2.818	1.531	3.166	3.384	4.892	3.877	2.19	4.31	2.602	0.859	1.0	0.207	1.226	TCGA-24-1464	0.011	0.005	0.034	0.0	0.016	0.01	0.0	0.014	0.011	0.019	0.881	0.099	0.16	0.157	0.088	0.076	0.453	2.005	2.319	1.531	0.207	0.839	2.602	2.602	0.859	0.921	1.599	4.892	0.376	other	0.85	0.937	0
TCGA-24-1467	51	G3	IIIC	1-10 MM	0	1	1	105.92	Desert	0.078	DIF_consensus	5403.968	7998.629	6544.671	-394.875	-1329.053	-1120.983	6367.348	105.031	1295.458	-3433.994	-1242.494	2652.577	6234.062	4591.224	4591.224	-109.246	2089.13	1529.132	5336.476	2089.13	3328.581	7223.527	6780.808	5344.987	11051.384	3377.136	2408.987	1.535	1.487	0.944	2.124	2.65	5.135	3.906	2.373	4.64	2.729	0.631	0.884	0.172	1.958	TCGA-24-1467	0.017	0.007	0.037	0.01	0.014	0.021	0.0	0.003	0.018	0.017	0.856	0.098	0.163	0.146	0.091	0.076	0.464	1.731	0.835	0.944	0.172	1.535	2.729	2.729	0.631	1.606	2.162	5.135	0.322	other	0.615	0.578	1
TCGA-24-1469	71	G3	IIIC	1-10 MM	1	0	0	9.1	Infiltrated	0.804	PRO_consensus	5732.594	7162.679	6614.32	-190.684	-630.542	440.764	7718.156	1195.127	1458.382	-2929.343	-221.981	3281.821	6330.879	5016.916	5016.916	8.26	2611.094	2594.069	5828.19	2611.094	3883.072	7073.153	6556.741	5996.703	11033.463	3835.059	2569.124	1.417	1.897	1.439	2.643	2.793	4.73	4.193	2.568	5.013	3.056	1.099	1.409	0.226	1.758	TCGA-24-1469	0.016	0.031	0.028	0.083	0.036	0.017	0.0	0.01	0.025	0.0	0.754	0.101	0.178	0.131	0.096	0.076	0.471	2.072	1.89	1.439	0.226	1.417	3.056	3.056	1.099	1.476	1.948	4.73	0.474	noBRIT	0.982	2.64	1
TCGA-24-1470	54	G3	IIIB	1-10 MM	1	0	0	3.45	Infiltrated	0.818	IMR_consensus	8157.973	7743.699	8576.088	1756.869	2399.246	1649.652	7278.907	2766.752	3029.924	-1955.58	1072.434	6465.657	9161.454	7259.076	7259.076	1999.102	5249.016	4403.893	8240.664	5249.016	4187.507	8067.984	7908.173	5862.775	10755.693	5190.72	3869.473	1.79	3.187	1.491	3.368	3.486	5.744	5.386	3.329	6.355	4.311	2.836	1.522	0.382	2.432	TCGA-24-1470	0.013	0.017	0.083	0.19	0.0	0.009	0.091	0.029	0.026	0.0	0.543	0.103	0.202	0.163	0.108	0.092	0.493	3.106	2.44	1.491	0.382	1.79	4.311	4.311	2.836	2.241	2.883	5.744	0.376	BRIT	0.848	2.562	1
TCGA-24-1471	60	G3	IIIC	>20 MM	0	0	0	1.18	Infiltrated	0.098	DIF_consensus	6027.884	8514.884	7506.135	649.926	-844.66	-118.313	6921.753	287.417	1253.262	-2587.524	-1173.104	2634.65	6697.278	4438.22	4438.22	527.959	2386.957	1708.927	5284.707	2386.957	3181.667	7010.392	6711.708	5334.444	11138.248	3214.575	2683.307	0.445	1.146	0.741	1.627	2.048	3.964	3.362	1.402	4.16	2.281	0.824	0.933	0.165	1.327	TCGA-24-1471	0.103	0.005	0.076	0.025	0.003	0.01	0.0	0.0	0.0	0.0	0.778	0.104	0.158	0.147	0.093	0.079	0.45	1.475	0.691	0.741	0.165	0.445	2.281	2.281	0.824	1.178	1.578	3.964	0.258	other	0.269	0.555	0
TCGA-24-1474	57	G3	IIIC	1-10 MM	0	1	1	22.21	Infiltrated	0.06	IMR_consensus	6027.797	7358.462	5576.075	-28.45	-2370.404	-963.482	6416.715	-1656.454	-777.824	-3301.806	-2690.791	1704.901	6653.034	3652.717	3652.717	262.123	1933.436	323.06	4483.361	1933.436	3418.328	6911.769	7373.654	4192.903	11055.114	2818.069	2605.355	0.461	0.942	0.803	1.214	1.595	4.191	3.576	1.575	4.509	4.172	1.178	1.115	0.152	1.655	TCGA-24-1474	0.014	0.054	0.09	0.006	0.039	0.014	0.0	0.003	0.015	0.0	0.765	0.096	0.176	0.131	0.109	0.106	0.475	0.845	0.436	0.803	0.152	0.461	4.172	4.172	1.178	1.957	2.602	4.191	0.15	other	0.029	0.331	1
TCGA-24-1549	58	G3	IIIB	nan	0	1	1	56.54	Infiltrated	0.034	IMR_consensus	7553.543	8378.171	5948.495	953.796	807.548	657.809	7853.634	4612.757	5646.003	-2174.021	2743.237	5498.42	8512.173	6977.414	6977.414	1447.903	3962.589	5080.39	7831.7	3962.589	4415.075	8700.233	8109.818	6420.747	10823.549	4735.415	2902.849	1.761	2.316	2.196	3.868	4.377	5.023	5.295	3.013	6.247	2.834	1.316	2.62	0.303	1.571	TCGA-24-1549	0.018	0.043	0.053	0.0	0.049	0.014	0.002	0.01	0.033	0.023	0.756	0.095	0.169	0.177	0.098	0.081	0.481	2.566	1.649	2.196	0.303	1.761	2.834	2.834	1.316	1.496	1.979	5.023	0.743	other	1.0	0.954	1
TCGA-24-1550	49	G3	IIIC	1-10 MM	1	1	1	41.03	Infiltrated	0.906	MES_consensus	5226.839	7057.852	7275.932	1677.913	274.024	2218.697	6487.775	1706.008	1854.117	-2373.239	-365.069	3979.606	6357.919	5814.661	5814.661	770.677	2482.029	2593.261	6695.567	2482.029	3873.403	6163.759	7408.826	4564.609	10997.628	5027.91	7810.299	1.434	2.247	1.155	2.826	2.915	8.312	4.543	2.829	5.366	4.21	1.365	1.093	0.243	1.98	TCGA-24-1550	0.012	0.017	0.078	0.0	0.073	0.018	0.0	0.007	0.018	0.014	0.763	0.082	0.181	0.147	0.112	0.111	0.485	1.794	2.243	1.155	0.243	1.434	4.21	4.21	1.365	1.995	3.406	8.312	0.346	noBRIT	0.739	2.756	2
TCGA-24-1551	53	G3	IIIC	1-10 MM	1	1	1	51.88	Infiltrated	0.786	IMR_consensus	7518.689	6936.357	7786.554	1606.901	686.187	2325.442	8181.695	3732.414	4923.328	-1697.445	2009.388	5616.08	8469.452	6807.829	6807.829	1520.948	4309.506	4636.761	7728.097	4309.506	4204.016	7597.698	7162.788	5742.164	11093.118	4228.952	2997.762	1.067	2.194	1.73	3.373	3.91	5.092	4.915	2.988	5.905	4.143	2.37	1.939	0.315	1.765	TCGA-24-1551	0.016	0.104	0.06	0.014	0.044	0.018	0.0	0.011	0.027	0.0	0.706	0.101	0.183	0.159	0.111	0.088	0.487	1.972	1.459	1.73	0.315	1.067	4.143	4.143	2.37	1.887	2.031	5.092	0.51	BRIT	0.992	2.635	1
TCGA-24-1552	77	G3	IIIC	1-10 MM	0	1	1	41.36	Desert	0.116	DIF_consensus	3524.944	7343.015	6585.009	55.23	-1566.62	-1226.134	7674.508	-1421.007	-1267.346	-2540.372	-2314.899	443.995	3399.232	1632.673	1632.673	89.512	678.024	296.331	2309.949	678.024	4420.491	7225.701	6764.61	5410.821	11004.185	3313.714	4426.74	0.382	0.863	0.549	0.897	0.949	5.083	2.176	1.031	3.063	2.684	0.739	0.566	0.135	1.029	TCGA-24-1552	0.014	0.006	0.054	0.0	0.0	0.017	0.0	0.004	0.013	0.037	0.855	0.089	0.155	0.132	0.089	0.082	0.449	1.381	0.403	0.549	0.135	0.382	2.684	2.684	0.739	1.422	2.112	5.083	0.121	other	0.015	0.442	1
TCGA-24-1562	67	G3	IIIC	1-10 MM	0	1	1	45.47	Infiltrated	0.028	DIF_consensus	6394.47	8904.958	6269.487	258.302	-68.186	1806.857	7767.756	956.492	2524.178	-2147.657	362.839	3399.995	7079.949	4433.216	4433.216	810.021	2393.143	2593.64	5250.764	2393.143	4009.41	6669.384	6691.914	5935.74	11039.217	3672.003	6023.627	1.222	1.736	1.253	2.153	2.821	6.71	3.579	1.684	4.3	2.991	2.415	1.456	0.25	1.379	TCGA-24-1562	0.027	0.045	0.061	0.014	0.027	0.012	0.0	0.006	0.021	0.0	0.787	0.099	0.18	0.144	0.095	0.076	0.477	1.98	1.03	1.253	0.25	1.222	2.991	2.991	2.415	1.59	2.263	6.71	0.281	other	0.383	0.4	1
TCGA-24-1563	66	G3	IIIC	1-10 MM	1	1	1	47.67	Infiltrated	0.898	MES_consensus	6828.078	7301.445	8360.051	219.795	-1429.669	1626.677	6296.637	374.047	1282.995	-1397.514	-475.496	3510.347	8133.651	5010.653	5010.653	905.117	3234.236	2376.136	5814.29	3234.236	5049.559	7228.715	7325.745	5145.733	10941.043	4074.499	7939.231	1.148	1.347	1.205	2.13	2.551	8.24	4.108	2.214	5.124	3.272	2.069	1.129	0.223	1.759	TCGA-24-1563	0.014	0.032	0.031	0.082	0.0	0.014	0.031	0.006	0.016	0.0	0.775	0.092	0.17	0.15	0.11	0.083	0.485	2.007	0.99	1.205	0.223	1.148	3.272	3.272	2.069	1.771	2.658	8.24	0.361	noBRIT	0.797	2.752	2
TCGA-24-1565	74	G3	IIIC	1-10 MM	0	1	1	10.25	Infiltrated	0.086	DIF_consensus	7677.939	8258.412	6678.462	519.45	1016.909	-1132.112	7360.947	895.239	2044.166	-2794.98	-72.313	3358.651	8777.66	3647.719	3647.719	541.609	3443.912	1767.053	4448.441	3443.912	3077.267	7771.565	7027.204	6513.873	10780.598	3767.592	1605.081	1.318	2.184	1.332	2.119	2.62	3.587	3.309	1.61	3.927	2.854	1.418	1.499	0.394	1.593	TCGA-24-1565	0.015	0.013	0.068	0.047	0.0	0.016	0.005	0.011	0.011	0.0	0.813	0.11	0.161	0.164	0.092	0.091	0.47	1.435	1.667	1.332	0.394	1.318	2.854	2.854	1.418	1.653	1.16	3.587	0.194	other	0.078	0.45	0
TCGA-24-1603	53	G3	IIIB	nan	0	1	1	90.09	Desert	0.148	DIF_consensus	6490.764	7857.593	7063.714	-634.977	-2834.096	167.165	7112.844	-1490.343	-846.021	-2321.364	-2612.356	2066.078	7539.833	4329.703	4329.703	-35.896	2609.299	923.502	5246.58	2609.299	2945.078	7700.929	7780.943	5178.915	11008.813	3264.644	3734.34	0.943	0.792	0.579	1.313	1.561	5.037	3.836	1.539	4.954	2.694	1.249	1.062	0.087	1.666	TCGA-24-1603	0.021	0.016	0.04	0.036	0.034	0.01	0.03	0.004	0.011	0.0	0.798	0.109	0.166	0.129	0.096	0.081	0.465	1.462	0.342	0.579	0.087	0.943	2.694	2.694	1.249	1.58	2.539	5.037	0.245	other	0.213	0.67	1
TCGA-24-1616	56	G3	IIIC	1-10 MM	0	1	1	38.21	Desert	0.062	DIF_consensus	5449.853	9016.325	7106.646	-1082.287	-2872.375	-205.402	6306.321	-1115.344	-249.334	-2451.013	-2012.424	1494.544	6270.515	4131.316	4131.316	-151.98	1324.264	1277.71	4922.171	1324.264	2892.547	5990.0	5528.867	4273.484	10947.647	2652.454	3225.469	0.89	0.432	0.787	1.081	1.402	5.202	3.335	1.06	4.454	1.976	0.548	1.426	0.089	0.819	TCGA-24-1616	0.017	0.0	0.1	0.025	0.02	0.019	0.025	0.002	0.011	0.001	0.78	0.104	0.161	0.122	0.088	0.063	0.455	1.143	0.248	0.787	0.089	0.89	1.976	1.976	0.548	1.413	2.082	5.202	0.24	other	0.196	0.441	1
TCGA-24-1842	49	G3	IIIC	1-10 MM	0	0	0	8.31	Infiltrated	0.12	IMR_consensus	6983.235	6807.915	6508.377	2097.774	3454.496	2042.377	7929.063	5289.333	5912.964	-2137.011	3164.6	6403.5	7916.224	7413.325	7413.325	2100.198	4545.205	5474.741	8243.328	4545.205	4981.058	7911.544	7673.203	6564.902	11119.495	5066.076	5450.331	1.058	3.157	1.805	3.9	4.188	6.54	5.068	3.514	5.761	3.942	1.366	1.748	0.375	1.667	TCGA-24-1842	0.016	0.082	0.05	0.096	0.0	0.016	0.0	0.029	0.035	0.0	0.676	0.093	0.184	0.166	0.103	0.083	0.499	2.679	2.245	1.805	0.375	1.058	3.942	3.942	1.366	1.84	2.003	6.54	0.575	other	0.998	0.982	1
TCGA-24-1843	66	G3	IIIC	1-10 MM	0	0	0	3.48	Infiltrated	0.084	IMR_consensus	6072.345	7712.989	7063.396	960.137	3277.08	1266.008	7837.913	2956.511	3046.075	-2101.41	1109.526	4539.911	6805.17	5240.235	5240.235	1226.795	2953.179	3226.789	6104.581	2953.179	3557.768	7045.601	6829.713	5966.367	11090.385	4494.527	3594.414	1.72	3.32	1.348	3.15	3.129	5.326	4.167	2.537	4.812	4.041	1.747	1.256	0.184	1.823	TCGA-24-1843	0.016	0.069	0.073	0.012	0.016	0.026	0.0	0.022	0.021	0.009	0.738	0.105	0.189	0.141	0.106	0.09	0.48	2.089	3.493	1.348	0.184	1.72	4.041	4.041	1.747	1.488	2.043	5.326	0.302	other	0.501	0.57	0
TCGA-24-1844	64	G3	IIIC	1-10 MM	1	0	0	3.71	Desert	0.83	DIF_consensus	4057.42	7604.483	7387.027	-1786.163	-5826.828	-2602.204	4646.506	-4434.683	-3667.452	-4111.417	-5265.202	-1405.706	4682.97	521.493	521.493	-1171.013	-1205.524	-1751.125	1139.761	-1205.524	3564.831	6147.026	4710.702	3691.843	10953.612	2415.818	3311.652	1.076	0.167	0.288	0.477	0.682	5.835	2.156	0.768	3.192	2.239	0.903	0.757	0.086	1.557	TCGA-24-1844	0.015	0.0	0.067	0.021	0.013	0.017	0.0	0.001	0.017	0.011	0.839	0.104	0.159	0.122	0.086	0.081	0.447	1.165	0.098	0.288	0.086	1.076	2.239	2.239	0.903	1.769	2.523	5.835	0.076	noBRIT	0.005	2.244	1
TCGA-24-1845	42	G3	IIIC	1-10 MM	1	0	0	3.81	Infiltrated	0.836	DIF_consensus	6587.07	7895.108	7804.353	144.101	-3143.832	1054.527	7389.787	-707.065	-101.96	-2421.286	-1295.372	3737.11	6658.065	6138.753	6138.753	787.054	2571.243	2678.618	7007.591	2571.243	3674.451	8440.849	7381.974	5805.663	11172.96	3400.005	1379.365	0.218	0.391	0.667	1.248	1.455	2.896	4.272	2.255	5.512	2.98	0.605	1.305	0.245	1.19	TCGA-24-1845	0.03	0.015	0.051	0.025	0.002	0.015	0.0	0.0	0.011	0.006	0.846	0.097	0.168	0.121	0.097	0.068	0.461	1.533	0.268	0.667	0.245	0.218	2.98	2.98	0.605	1.403	1.754	2.896	0.248	noBRIT	0.224	2.459	0
TCGA-24-1846	45	G3	IIIC	1-10 MM	1	0	0	4.37	Infiltrated	0.916	IMR_consensus	7801.997	6776.746	8339.416	627.721	-1079.849	1979.757	8219.164	1139.877	1567.404	-1971.185	203.606	4364.718	8374.599	6025.589	6025.589	1444.39	4469.468	4031.353	6960.472	4469.468	4364.138	8043.554	7586.566	5855.972	11150.793	4385.475	5197.08	0.821	1.37	1.401	2.309	2.567	6.337	4.724	3.113	5.765	3.47	1.041	1.467	0.312	1.627	TCGA-24-1846	0.014	0.034	0.027	0.171	0.0	0.014	0.022	0.013	0.026	0.0	0.679	0.096	0.182	0.138	0.11	0.077	0.482	1.714	0.84	1.401	0.312	0.821	3.47	3.47	1.041	1.581	1.494	6.337	0.409	BRIT	0.923	2.855	0
TCGA-24-1847	45	G3	IV	1-10 MM	1	0	0	11.27	Infiltrated	0.938	IMR_consensus	7501.865	7182.514	8369.11	2603.558	6775.947	2457.156	7713.176	7024.417	6818.042	-1817.576	3982.558	7987.0	8267.328	8722.408	8722.408	2324.345	5370.673	6255.436	9464.242	5370.673	5498.815	7709.061	6433.814	6291.573	10828.849	5630.404	4375.921	1.638	4.725	1.849	4.816	4.738	6.252	6.134	4.567	7.025	4.21	1.689	0.982	0.306	2.438	TCGA-24-1847	0.021	0.023	0.088	0.083	0.0	0.013	0.003	0.072	0.023	0.0	0.673	0.095	0.193	0.19	0.11	0.098	0.496	2.894	3.858	1.849	0.306	1.638	4.21	4.21	1.689	1.526	2.423	6.252	0.527	BRIT	0.995	3.051	2
TCGA-24-1850	72	G3	IIIC	1-10 MM	1	0	0	5.52	Infiltrated	0.748	MES_consensus	5240.929	7326.907	7114.744	398.419	878.478	2020.782	6740.113	1363.446	1118.547	-2478.044	-129.843	3687.076	6316.564	5065.952	5065.952	895.175	2389.167	2712.878	5856.466	2389.167	3685.822	6087.312	5340.451	4864.542	10972.387	4646.449	6222.037	1.47	2.378	1.246	2.576	2.49	7.23	3.96	2.77	4.971	3.476	1.272	1.264	0.21	1.695	TCGA-24-1850	0.011	0.027	0.049	0.02	0.023	0.02	0.036	0.008	0.008	0.0	0.798	0.097	0.174	0.136	0.1	0.095	0.474	2.346	1.892	1.246	0.21	1.47	3.476	3.476	1.272	1.506	1.898	7.23	0.325	noBRIT	0.635	2.322	1
TCGA-24-2024	72	G3	IIIC	1-10 MM	1	1	1	58.12	Infiltrated	0.812	MES_consensus	6237.96	6414.639	7031.94	-192.095	-2948.578	1327.152	6819.328	-1080.821	-315.214	-2380.196	-2063.255	1983.35	7356.529	3537.952	3537.952	122.572	2352.142	538.108	4333.21	2352.142	3871.607	6530.72	4953.982	4441.076	10927.163	3914.582	5975.257	0.936	0.823	0.781	1.541	1.857	7.278	3.372	1.438	4.31	3.095	0.898	0.941	0.186	1.731	TCGA-24-2024	0.032	0.021	0.007	0.168	0.0	0.016	0.065	0.004	0.008	0.0	0.679	0.102	0.159	0.138	0.095	0.076	0.467	1.361	0.383	0.781	0.186	0.936	3.095	3.095	0.898	1.51	2.278	7.278	0.286	noBRIT	0.412	2.442	1
TCGA-24-2033	87	G3	IIIC	>20 MM	1	1	1	18.46	Desert	0.726	MES_consensus	5613.524	8814.93	8072.546	-591.655	-2580.57	-733.77	6062.039	-1979.184	-1561.814	-2571.434	-2797.763	720.915	6986.635	1734.4	1734.4	-321.457	1364.245	-905.412	2395.127	1364.245	3051.525	5323.954	4508.539	3275.614	11125.954	3235.521	6171.066	1.194	0.775	0.579	0.996	1.161	6.774	2.444	1.602	3.353	2.559	0.706	0.97	0.12	1.158	TCGA-24-2033	0.024	0.005	0.037	0.101	0.0	0.02	0.036	0.006	0.004	0.0	0.768	0.096	0.166	0.127	0.087	0.078	0.459	1.435	0.506	0.579	0.12	1.194	2.559	2.559	0.706	1.445	1.893	6.774	0.13	noBRIT	0.019	2.036	0
TCGA-24-2035	65	G3	IIIC	1-10 MM	0	1	1	28.16	Infiltrated	0.178	MES_consensus	6397.453	7228.937	7115.733	1112.027	1185.292	3534.146	6526.261	2959.96	3586.021	-1210.034	997.458	5389.373	7519.758	6794.751	6794.751	1559.081	3802.256	3972.93	7795.611	3802.256	4503.49	7041.587	6267.384	5302.522	10829.334	4644.71	7441.613	1.845	2.515	1.669	3.152	3.399	8.26	4.851	2.612	5.66	3.876	2.327	1.888	0.407	2.295	TCGA-24-2035	0.033	0.047	0.061	0.033	0.0	0.013	0.0	0.012	0.021	0.0	0.78	0.089	0.186	0.161	0.113	0.102	0.478	2.413	2.155	1.669	0.407	1.845	3.876	3.876	2.327	2.614	3.396	8.26	0.365	other	0.814	0.888	2
TCGA-24-2036	50	G3	IIIA	1-10 MM	0	1	1	63.97	Desert	0.202	PRO_consensus	3523.036	7639.078	6963.07	-1444.498	-3538.876	-2419.336	5418.9	-4128.033	-5466.004	-3827.124	-5403.884	-1853.931	3550.707	-323.245	-323.245	-1086.526	-2144.975	-2358.983	259.935	-2144.975	3180.934	5325.908	3674.428	3670.354	10981.387	2485.055	3649.259	0.969	1.037	0.326	0.793	0.334	5.962	2.092	0.768	3.124	2.893	0.795	0.689	0.147	2.171	TCGA-24-2036	0.021	0.0	0.072	0.087	0.0	0.031	0.015	0.005	0.022	0.0	0.747	0.106	0.18	0.109	0.089	0.081	0.469	1.293	1.76	0.326	0.147	0.969	2.893	2.893	0.795	1.969	2.566	5.962	0.113	other	0.013	0.656	2
TCGA-24-2254	66	G3	IIIC	1-10 MM	1	1	1	57.03	Infiltrated	0.824	MES_consensus	5546.137	7392.314	7525.062	-383.222	-4611.259	509.007	5994.593	-3714.108	-3134.268	-2376.997	-4316.299	206.774	6173.508	1230.49	1230.49	-191.545	-244.873	-1636.721	1884.044	-244.873	4446.686	5505.288	5489.414	3951.321	10881.625	3220.628	5061.552	0.834	0.569	0.491	0.896	1.118	7.353	2.81	1.399	3.717	4.233	1.909	0.458	0.225	2.333	TCGA-24-2254	0.022	0.08	0.115	0.056	0.035	0.029	0.0	0.001	0.026	0.0	0.636	0.099	0.194	0.11	0.111	0.1	0.493	1.473	0.428	0.491	0.225	0.834	4.233	4.233	1.909	1.934	2.976	7.353	0.154	noBRIT	0.032	2.319	3
TCGA-24-2261	76	G3	IIIC	11-20 MM	0	1	1	0.79	Infiltrated	0.098	IMR_consensus	7775.489	7121.764	7320.637	1950.393	3123.98	1600.786	7344.555	3957.134	4341.97	-2983.48	2526.79	6593.024	8859.838	7195.018	7195.018	1788.672	5432.56	4685.024	7958.999	5432.56	5048.997	8267.369	7586.674	5660.588	11019.62	4951.08	5457.66	1.475	3.523	1.858	3.864	4.032	7.234	5.482	3.883	6.306	4.253	1.457	1.244	0.379	2.128	TCGA-24-2261	0.016	0.03	0.097	0.051	0.0	0.017	0.0	0.03	0.036	0.0	0.723	0.097	0.193	0.177	0.106	0.102	0.49	2.784	2.796	1.858	0.379	1.475	4.253	4.253	1.457	1.711	2.354	7.234	0.445	other	0.965	0.773	1
TCGA-24-2267	58	G3	IIB	NO MACROSCOPIC DISEASE	1	1	1	47.51	Infiltrated	0.866	IMR_consensus	7177.585	6962.097	8120.519	2585.119	2391.937	1383.35	7813.253	2914.153	3173.336	-2213.734	1316.881	6983.35	8051.15	8196.845	8196.845	2423.222	4449.229	4824.059	9121.171	4449.229	4701.003	8381.516	7936.173	6349.056	11067.882	5421.993	3418.961	2.608	3.037	1.567	3.262	3.363	5.523	5.943	4.367	6.989	4.603	1.139	1.67	0.294	2.246	TCGA-24-2267	0.043	0.062	0.108	0.077	0.0	0.018	0.0	0.021	0.035	0.0	0.637	0.103	0.203	0.152	0.108	0.093	0.494	2.581	2.265	1.567	0.294	2.608	4.603	4.603	1.139	1.628	2.714	5.523	0.34	BRIT	0.709	2.645	1
TCGA-24-2271	55	G3	IIIC	>20 MM	0	1	1	31.61	Infiltrated	0.216	DIF_consensus	6544.54	7803.366	7173.951	1845.557	715.357	1747.989	7933.169	1923.356	2813.092	-1984.478	1383.063	5424.063	7446.356	5744.482	5744.482	1708.297	3803.564	3766.929	6642.655	3803.564	4392.986	7923.501	7468.916	6268.511	10880.857	4488.41	6205.364	2.707	2.502	1.869	2.981	3.332	7.521	4.481	3.005	5.23	3.684	1.611	1.522	0.443	2.229	TCGA-24-2271	0.04	0.124	0.037	0.148	0.0	0.018	0.0	0.019	0.057	0.0	0.558	0.1	0.197	0.158	0.103	0.075	0.488	2.938	1.966	1.869	0.443	2.707	3.684	3.684	1.611	1.825	2.651	7.521	0.399	other	0.906	1.027	1
TCGA-24-2280	74	G3	IIIC	1-10 MM	1	0	0	70.41	Excluded	0.778	MES_consensus	4276.92	7316.365	6784.52	-160.555	-1515.965	43.772	5557.94	-864.171	-174.908	-3052.274	-2051.872	1051.475	5045.451	860.787	860.787	-81.311	0.758	-750.669	1514.005	0.758	4238.972	5605.41	5335.744	3765.141	10999.846	3250.461	8171.369	1.916	1.731	0.803	2.009	2.292	8.53	2.503	1.489	3.016	3.587	1.116	0.889	0.358	2.221	TCGA-24-2280	0.033	0.038	0.05	0.022	0.011	0.016	0.0	0.006	0.018	0.0	0.805	0.081	0.191	0.14	0.101	0.097	0.462	1.982	1.272	0.803	0.358	1.916	3.587	3.587	1.116	1.703	3.475	8.53	0.218	noBRIT	0.126	2.274	3
TCGA-24-2281	68	G3	IIA	1-10 MM	1	0	0	44.58	Infiltrated	0.844	IMR_consensus	7330.026	7627.034	7773.52	1379.551	944.057	2758.926	7719.462	3262.78	3089.832	-2313.825	1548.784	6313.377	8260.754	6943.554	6943.554	1443.22	4354.059	4751.132	7730.985	4354.059	4484.275	7264.007	5950.251	6297.759	11126.711	4917.589	3442.855	1.369	2.371	1.405	3.255	3.282	5.537	5.298	3.973	6.471	4.257	1.967	1.221	0.159	1.747	TCGA-24-2281	0.019	0.041	0.046	0.028	0.017	0.013	0.0	0.012	0.039	0.0	0.784	0.091	0.193	0.141	0.106	0.073	0.502	2.679	1.647	1.405	0.159	1.369	4.257	4.257	1.967	1.602	1.72	5.537	0.473	BRIT	0.981	2.743	1
TCGA-24-2288	70	G3	IIIC	>20 MM	1	1	1	0.82	Infiltrated	0.814	IMR_consensus	6349.113	6567.723	7522.0	1099.3	1802.474	1707.325	6673.77	2765.685	3469.831	-2384.415	1603.789	5916.546	7217.069	6976.379	6976.379	1425.906	3945.585	4366.216	7796.69	3945.585	4880.759	8032.841	7908.745	6090.441	10936.422	4419.663	5953.342	2.892	2.957	1.662	3.354	3.642	7.441	5.111	3.706	6.024	3.753	1.03	1.38	0.388	2.211	TCGA-24-2288	0.044	0.032	0.056	0.0	0.024	0.019	0.0	0.011	0.028	0.001	0.785	0.105	0.189	0.168	0.105	0.092	0.48	3.026	2.31	1.662	0.388	2.892	3.753	3.753	1.03	1.682	2.793	7.441	0.4	BRIT	0.907	2.58	2
TCGA-24-2289	68	G3	IV	>20 MM	1	1	1	67.32	Infiltrated	0.904	MES_consensus	5400.471	6844.077	7157.64	612.677	-1932.889	733.626	7223.471	-1075.666	-355.159	-2348.16	-1915.964	2644.094	6209.64	3830.876	3830.876	985.194	1917.813	1012.354	4664.277	1917.813	5518.131	7438.382	7563.671	5263.091	10939.58	3846.655	7615.901	1.296	1.387	0.859	1.76	2.088	8.262	3.798	2.0	4.486	4.165	0.763	0.599	0.188	1.883	TCGA-24-2289	0.019	0.092	0.092	0.0	0.016	0.016	0.0	0.002	0.028	0.0	0.735	0.088	0.194	0.139	0.117	0.103	0.484	2.132	0.686	0.859	0.188	1.296	4.165	4.165	0.763	1.752	2.503	8.262	0.219	noBRIT	0.129	2.603	2
TCGA-24-2290	56	G3	IIIC	1-10 MM	1	1	1	36.21	Infiltrated	0.854	IMR_consensus	6097.918	7177.35	7333.151	928.155	-2097.865	1339.814	7854.897	-871.793	-319.569	-1446.44	-1724.929	2910.178	6475.118	4739.071	4739.071	1066.595	1823.35	1817.885	5585.607	1823.35	4521.899	7685.857	7758.57	5554.276	11097.528	3781.398	4396.586	1.463	0.828	0.669	1.386	1.631	5.862	3.867	2.195	4.855	4.475	1.61	0.935	0.141	1.69	TCGA-24-2290	0.012	0.107	0.1	0.005	0.041	0.016	0.0	0.003	0.025	0.0	0.69	0.097	0.185	0.12	0.115	0.093	0.484	1.701	0.521	0.669	0.141	1.463	4.475	4.475	1.61	1.893	2.403	5.862	0.221	BRIT	0.136	2.476	1
TCGA-24-2293	47	G3	nan	>20 MM	1	1	1	16.62	Infiltrated	0.87	MES_consensus	6437.501	7543.468	6859.251	1218.327	1077.765	2335.268	7874.482	2072.868	2007.559	-2145.107	527.748	4687.088	7125.783	5534.806	5534.806	1540.998	3254.26	2962.448	6525.861	3254.26	5445.701	7851.729	7444.271	5780.196	10810.923	4516.851	8124.136	1.93	2.71	1.618	3.143	3.173	8.96	4.489	2.297	5.177	4.817	2.453	1.289	0.36	2.637	TCGA-24-2293	0.018	0.106	0.113	0.0	0.04	0.026	0.0	0.013	0.031	0.0	0.654	0.087	0.211	0.147	0.118	0.109	0.488	2.43	1.921	1.618	0.36	1.93	4.817	4.817	2.453	2.305	3.076	8.96	0.405	noBRIT	0.916	2.731	3
TCGA-24-2298	55	G3	IIIC	>20 MM	1	1	1	53.22	Infiltrated	0.826	MES_consensus	5600.763	7524.724	8268.878	-344.171	-1246.657	845.315	6366.193	-469.604	-514.348	-1946.861	-1464.06	2568.668	6404.284	4288.576	4288.576	722.044	1736.685	1778.71	5167.452	1736.685	5314.509	7974.073	7655.789	5650.023	10782.062	3674.868	6904.96	0.365	1.322	0.954	1.653	1.632	7.385	3.613	1.775	4.637	2.39	0.504	1.151	0.205	1.348	TCGA-24-2298	0.009	0.05	0.028	0.116	0.0	0.02	0.021	0.01	0.014	0.0	0.733	0.097	0.157	0.148	0.099	0.08	0.464	1.895	0.764	0.954	0.205	0.365	2.39	2.39	0.504	1.997	2.307	7.385	0.278	noBRIT	0.37	2.469	2
TCGA-25-1312	69	G3	IV	1-10 MM	0	1	1	1.02	Infiltrated	0.042	DIF_consensus	5642.681	9240.246	6382.925	-495.408	-1777.202	-1133.098	7286.349	-1625.376	-1096.323	-3074.323	-2664.071	1225.486	6625.744	3147.947	3147.947	-130.703	1107.717	197.863	3907.226	1107.717	2950.342	7246.45	6832.54	4809.914	10991.547	2926.682	3780.971	0.958	1.058	0.719	1.125	1.342	5.666	3.016	1.369	3.916	3.082	0.812	1.493	0.143	1.406	TCGA-25-1312	0.016	0.003	0.038	0.016	0.022	0.013	0.006	0.003	0.008	0.007	0.87	0.105	0.168	0.124	0.091	0.087	0.458	1.635	0.962	0.719	0.143	0.958	3.082	3.082	0.812	1.366	2.165	5.666	0.123	other	0.016	0.253	1
TCGA-25-1313	62	G3	IV	1-10 MM	1	1	1	26.94	Infiltrated	0.928	IMR_consensus	7001.53	5723.299	7813.286	668.587	-2588.588	462.847	7083.472	-974.419	-28.495	-2344.527	-2046.188	3442.892	7640.158	5575.449	5575.449	1020.109	2616.027	1893.466	6594.567	2616.027	4098.311	9000.893	7994.541	5950.234	10859.876	3522.965	4806.548	1.186	0.897	0.876	1.569	1.973	6.291	4.47	2.266	5.425	4.271	0.991	1.29	0.256	2.085	TCGA-25-1313	0.026	0.011	0.127	0.032	0.01	0.014	0.0	0.002	0.019	0.004	0.755	0.097	0.176	0.145	0.111	0.107	0.471	1.731	0.629	0.876	0.256	1.186	4.271	4.271	0.991	1.885	2.369	6.291	0.201	BRIT	0.09	2.644	2
TCGA-25-1315	50	G3	IIIC	1-10 MM	0	1	1	52.01	Desert	0.202	PRO_consensus	2917.801	7660.041	7539.634	-2220.441	-2057.167	-2840.225	5126.894	-3328.233	-4237.656	-4346.598	-4681.948	-1504.744	2216.51	96.578	96.578	-1215.676	-1472.55	-1666.026	759.845	-1472.55	2184.28	6967.71	6853.516	2535.051	10993.772	2214.354	3440.773	1.218	1.089	0.288	0.679	0.404	5.429	2.066	1.366	2.939	2.043	1.019	0.496	0.084	1.358	TCGA-25-1315	0.023	0.0	0.028	0.026	0.016	0.011	0.004	0.003	0.01	0.003	0.876	0.096	0.164	0.114	0.084	0.078	0.434	1.166	1.092	0.288	0.084	1.218	2.043	2.043	1.019	1.422	2.401	5.429	0.085	other	0.007	0.624	1
TCGA-25-1316	55	G3	IIIC	1-10 MM	0	1	1	42.02	Desert	0.074	PRO_consensus	5513.041	7726.27	5983.424	440.979	5371.107	-1060.736	6499.657	3818.408	2849.402	-3351.336	1044.687	3682.977	6359.813	4699.789	4699.789	-232.478	2869.912	3186.666	5362.196	2869.912	2193.738	6246.218	4826.532	5284.354	11126.128	4218.48	4195.154	1.639	3.988	1.506	3.415	3.063	4.98	3.649	2.558	4.494	2.185	0.501	0.837	0.25	1.125	TCGA-25-1316	0.013	0.0	0.02	0.026	0.018	0.018	0.025	0.037	0.004	0.019	0.821	0.097	0.167	0.166	0.078	0.07	0.471	2.016	4.718	1.506	0.25	1.639	2.185	2.185	0.501	1.383	2.25	4.98	0.395	other	0.898	0.653	2
TCGA-25-1319	73	G3	IIIC	11-20 MM	0	1	1	64.95	Infiltrated	0.058	IMR_consensus	6779.908	8175.163	5372.972	-164.547	-180.667	-852.285	6464.351	579.381	962.761	-2951.316	-653.064	3382.296	7906.852	5114.209	5114.209	450.334	3387.661	2353.343	6047.231	3387.661	3092.764	8123.633	7635.657	4999.578	10792.017	3388.479	3490.264	1.055	1.854	1.036	2.205	2.384	5.041	4.274	2.373	5.405	3.52	0.853	1.241	0.201	1.649	TCGA-25-1319	0.016	0.048	0.073	0.026	0.033	0.012	0.0	0.007	0.018	0.0	0.767	0.1	0.174	0.14	0.094	0.091	0.474	1.824	1.224	1.036	0.201	1.055	3.52	3.52	0.853	1.671	2.471	5.041	0.305	other	0.521	0.506	1
TCGA-25-1320	65	G3	IIIC	1-10 MM	0	1	1	37.95	Infiltrated	0.074	MES_consensus	5024.561	7886.835	6302.276	-288.087	-1639.136	523.438	7070.427	-971.544	-602.535	-2796.932	-1709.771	2134.013	5778.716	3593.458	3593.458	403.016	1339.506	1087.797	4428.078	1339.506	4707.0	7156.602	7212.818	4956.173	10970.02	3601.737	7392.891	1.811	1.544	1.04	1.854	2.027	8.252	3.657	1.938	4.508	3.409	1.795	1.066	0.215	1.865	TCGA-25-1320	0.019	0.047	0.062	0.072	0.0	0.027	0.0	0.009	0.027	0.0	0.736	0.087	0.184	0.135	0.107	0.099	0.472	1.964	1.146	1.04	0.215	1.811	3.409	3.409	1.795	1.793	2.659	8.252	0.253	other	0.247	0.487	3
TCGA-25-1322	62	G3	IV	>20 MM	0	1	1	2.99	Infiltrated	0.074	IMR_consensus	4551.139	8285.822	6609.417	557.915	-4269.111	1854.756	7838.381	-1506.754	-487.11	-2030.862	-2250.941	2470.932	4670.139	4327.534	4327.534	838.391	1092.64	1270.859	5234.823	1092.64	4234.414	8258.721	7946.205	5713.839	10955.192	3637.657	5320.099	1.703	0.463	0.806	1.485	1.871	6.724	3.878	2.058	4.79	3.785	1.527	1.162	0.306	1.769	TCGA-25-1322	0.021	0.05	0.123	0.024	0.034	0.018	0.0	0.002	0.022	0.004	0.702	0.092	0.178	0.128	0.115	0.099	0.467	1.74	0.318	0.806	0.306	1.703	3.785	3.785	1.527	2.318	2.593	6.724	0.263	other	0.293	0.499	2
TCGA-25-1323	72	G3	IIIC	1-10 MM	0	1	1	12.98	Desert	0.048	PRO_consensus	3715.475	8458.931	6245.565	-1004.029	-1655.721	-1196.127	6382.38	-2086.272	-2737.37	-3394.687	-3076.263	-146.939	4049.23	1369.609	1369.609	-568.062	-1175.385	-510.557	2093.459	-1175.385	2997.419	6485.354	6246.194	4003.666	11086.098	2541.45	4993.688	1.361	1.461	0.76	1.268	0.998	6.833	2.543	1.555	3.411	2.445	0.813	0.883	0.185	1.622	TCGA-25-1323	0.02	0.004	0.039	0.01	0.028	0.012	0.024	0.004	0.008	0.007	0.846	0.096	0.169	0.117	0.093	0.087	0.447	1.727	2.095	0.76	0.185	1.361	2.445	2.445	0.813	1.719	2.572	6.833	0.178	other	0.055	0.332	2
TCGA-25-1326	61	G3	IIIC	1-10 MM	1	1	1	41.03	Infiltrated	0.834	MES_consensus	5938.754	7225.497	7009.473	716.393	-34.273	1193.61	6914.191	766.412	1324.092	-2883.344	-445.203	3855.316	7103.375	5697.818	5697.818	1164.314	3241.653	2704.256	6456.491	3241.653	4899.689	6424.461	5860.046	4509.677	10911.821	4131.636	7216.665	1.299	2.102	1.104	2.487	2.762	7.696	4.506	3.119	5.534	4.218	1.107	1.173	0.266	1.858	TCGA-25-1326	0.024	0.042	0.091	0.004	0.019	0.013	0.0	0.009	0.022	0.013	0.762	0.101	0.181	0.145	0.109	0.115	0.48	2.442	1.552	1.104	0.266	1.299	4.218	4.218	1.107	1.877	2.542	7.696	0.291	noBRIT	0.441	2.505	3
TCGA-25-1328	38	G3	IIIC	1-10 MM	0	1	1	66.0	Infiltrated	0.064	MES_consensus	5855.136	7841.24	5507.025	414.72	-1465.364	645.8	7018.96	303.434	1271.103	-2472.951	-290.997	2354.287	6912.261	2961.445	2961.445	277.346	1385.398	1348.606	3615.016	1385.398	5076.439	6056.696	4775.706	4591.354	10975.817	3785.647	6919.73	1.326	1.437	1.229	2.248	2.723	7.814	3.236	1.968	3.861	3.55	2.188	1.268	0.306	1.764	TCGA-25-1328	0.038	0.022	0.038	0.147	0.0	0.02	0.015	0.007	0.017	0.0	0.696	0.09	0.179	0.152	0.1	0.089	0.482	1.597	1.386	1.229	0.306	1.326	3.55	3.55	2.188	1.853	2.475	7.814	0.41	other	0.925	0.645	3
TCGA-25-1329	76	G3	IIIC	11-20 MM	0	1	1	15.01	Infiltrated	0.118	MES_consensus	3896.707	7651.884	6045.501	-478.632	-1062.047	-737.187	6671.626	-820.306	-121.844	-3512.713	-1803.984	1966.474	4179.295	3206.053	3206.053	230.666	331.57	892.466	4075.732	331.57	4962.501	6479.993	6606.072	4467.41	10941.034	3077.187	5837.505	1.631	1.571	0.773	1.682	2.028	7.42	3.249	1.55	4.186	3.769	0.711	0.582	0.219	1.993	TCGA-25-1329	0.047	0.009	0.044	0.074	0.0	0.017	0.0	0.005	0.008	0.0	0.796	0.086	0.18	0.141	0.101	0.102	0.463	1.953	1.053	0.773	0.219	1.631	3.769	3.769	0.711	2.252	2.283	7.42	0.185	other	0.064	0.523	2
TCGA-25-2042	60	G3	IIIC	>20 MM	0	1	1	13.01	Excluded	0.254	MES_consensus	5549.244	7433.093	7551.605	372.091	53.769	1114.895	7125.578	689.057	1353.62	-1683.252	-689.837	2582.058	6416.241	2906.773	2906.773	914.762	1862.648	1002.47	3703.607	1862.648	5549.209	6158.013	6722.473	4185.113	10650.863	4053.429	9074.545	1.55	2.136	1.021	2.432	2.734	9.46	3.288	1.768	3.906	3.557	1.376	0.853	0.246	2.324	TCGA-25-2042	0.049	0.131	0.063	0.0	0.014	0.014	0.0	0.005	0.043	0.0	0.682	0.084	0.187	0.147	0.116	0.091	0.494	2.022	1.408	1.021	0.246	1.55	3.557	3.557	1.376	2.486	3.491	9.46	0.294	other	0.459	1.003	3
TCGA-25-2391	57	G3	IIIC	>20 MM	0	1	1	49.02	Infiltrated	0.196	DIF_consensus	6897.938	7626.643	8074.915	78.283	-190.336	1454.362	7428.09	376.864	603.664	-1626.997	-1080.112	2953.317	7802.341	4593.604	4593.604	638.564	3102.191	1844.868	5544.917	3102.191	3526.331	7896.136	7647.872	5058.078	10966.593	3356.891	2315.992	0.647	1.847	0.975	2.117	2.225	4.839	3.909	1.296	4.76	2.918	1.284	0.996	0.149	1.422	TCGA-25-2391	0.016	0.048	0.071	0.076	0.0	0.012	0.039	0.011	0.011	0.0	0.717	0.108	0.174	0.136	0.108	0.078	0.483	1.638	1.23	0.975	0.149	0.647	2.918	2.918	1.284	1.851	1.93	4.839	0.277	other	0.364	0.832	0
TCGA-25-2392	75	G3	IV	11-20 MM	1	1	1	1.02	Infiltrated	0.932	IMR_consensus	6470.712	7220.153	7695.446	1852.339	-1555.827	-1349.26	7036.29	-1469.325	-661.366	-2468.283	-1916.69	3838.382	7485.676	4846.892	4846.892	1187.46	2915.602	1520.179	5721.425	2915.602	4101.16	7813.713	7872.478	5813.247	10839.731	4223.353	3658.107	1.016	1.395	0.876	1.438	1.8	5.343	4.238	2.722	5.111	4.769	1.05	0.994	0.17	2.4	TCGA-25-2392	0.017	0.027	0.195	0.085	0.0	0.007	0.019	0.007	0.021	0.0	0.621	0.094	0.199	0.131	0.116	0.107	0.493	2.261	1.009	0.876	0.17	1.016	4.769	4.769	1.05	1.811	2.276	5.343	0.124	BRIT	0.016	2.564	1
TCGA-25-2393	81	G3	IIIC	11-20 MM	0	1	1	38.01	Desert	0.088	PRO_consensus	4855.664	7762.022	6684.75	-773.983	-1.395	2200.451	7821.347	917.837	1025.757	-2009.551	-542.958	2858.194	5501.413	4402.245	4402.245	16.028	2227.319	1959.851	5111.734	2227.319	2487.33	5239.048	3788.196	3702.315	11302.011	3627.541	4234.249	0.978	1.532	0.914	1.893	1.939	5.329	3.197	1.891	4.228	2.246	1.476	1.202	0.118	1.265	TCGA-25-2393	0.012	0.012	0.023	0.0	0.008	0.01	0.006	0.006	0.008	0.026	0.889	0.08	0.169	0.12	0.098	0.066	0.447	1.35	0.979	0.914	0.118	0.978	2.246	2.246	1.476	1.454	1.641	5.329	0.321	other	0.611	0.603	1
TCGA-25-2396	71	G3	IIIC	NO MACROSCOPIC DISEASE	0	1	1	3.02	Infiltrated	0.05	IMR_consensus	6606.276	8056.551	7405.555	1237.921	412.877	1730.832	7485.733	3137.361	4357.998	-2107.096	1717.212	5146.408	7498.469	6543.538	6543.538	997.181	3555.681	4052.31	7349.376	3555.681	3727.193	8424.304	7633.807	6617.589	10953.699	4586.91	4972.522	0.911	1.977	1.616	3.035	3.569	5.89	4.656	3.159	5.274	3.14	1.013	1.777	0.233	1.611	TCGA-25-2396	0.023	0.035	0.064	0.029	0.011	0.024	0.0	0.007	0.021	0.0	0.785	0.102	0.166	0.161	0.097	0.078	0.472	2.148	1.248	1.616	0.233	0.911	3.14	3.14	1.013	1.493	2.04	5.89	0.453	other	0.971	0.658	0
TCGA-25-2398	71	G3	IIIC	1-10 MM	0	1	1	44.98	Excluded	0.15	MES_consensus	5573.504	8343.568	6529.896	-519.444	-1808.941	1291.983	7442.399	-1253.636	-520.992	-2747.513	-2454.422	2495.299	6658.597	3899.661	3899.661	102.347	2061.262	719.207	4698.357	2061.262	4250.998	6011.512	5895.613	4581.298	10911.97	3924.413	8321.478	1.162	1.399	0.55	1.634	1.952	8.492	3.616	1.83	4.547	4.341	2.046	0.846	0.182	2.264	TCGA-25-2398	0.049	0.04	0.026	0.111	0.0	0.009	0.081	0.001	0.008	0.0	0.674	0.088	0.182	0.131	0.101	0.098	0.479	1.741	1.04	0.55	0.182	1.162	4.341	4.341	2.046	1.425	2.465	8.492	0.184	other	0.062	0.604	3
TCGA-25-2399	80	G3	IIIC	>20 MM	0	1	1	19.98	Infiltrated	0.15	MES_consensus	6924.585	8021.896	6758.294	397.556	-490.879	1849.189	7022.068	3932.982	4990.792	-2550.504	1961.392	4769.178	8143.773	6214.912	6214.912	794.303	3678.068	4075.053	7097.55	3678.068	4537.956	8140.622	7685.897	5688.87	11054.36	4087.862	6014.099	1.123	1.999	2.181	3.687	4.217	7.402	4.827	2.901	5.626	3.734	0.797	2.321	0.336	1.435	TCGA-25-2399	0.021	0.133	0.045	0.014	0.067	0.016	0.0	0.007	0.025	0.0	0.672	0.099	0.171	0.167	0.11	0.088	0.484	2.176	1.169	2.181	0.336	1.123	3.734	3.734	0.797	1.769	2.608	7.402	0.622	other	0.999	1.115	1
TCGA-25-2400	76	G3	IIIC	NO MACROSCOPIC DISEASE	0	1	1	41.99	Infiltrated	0.074	DIF_consensus	5895.467	7861.008	6088.064	-880.983	-972.439	-1388.398	5628.877	-1721.121	-2054.121	-3648.696	-3364.775	1352.784	6578.436	3837.199	3837.199	43.57	1447.101	408.947	4734.226	1447.101	3310.097	6832.815	6962.771	4244.615	11012.911	2739.736	2807.792	0.976	1.51	0.498	1.189	1.049	5.044	3.464	1.628	4.535	2.941	0.557	0.989	0.106	1.389	TCGA-25-2400	0.022	0.002	0.073	0.017	0.017	0.017	0.0	0.005	0.01	0.008	0.828	0.102	0.164	0.125	0.092	0.08	0.474	1.523	1.733	0.498	0.106	0.976	2.941	2.941	0.557	1.61	2.094	5.044	0.116	other	0.014	0.328	1
TCGA-25-2401	64	G3	IIIC	1-10 MM	1	1	1	2.96	Infiltrated	0.902	MES_consensus	7206.081	7656.657	7605.542	1974.833	1286.378	2592.125	7679.359	2418.831	3268.958	-1851.946	628.369	5584.084	8107.426	7362.669	7362.669	2058.998	4115.815	3991.975	8308.317	4115.815	5128.449	8423.407	7874.225	5667.11	11049.547	4854.65	7479.025	1.315	2.376	1.131	2.859	3.219	7.966	5.229	2.914	6.144	4.754	1.8	1.107	0.22	2.006	TCGA-25-2401	0.019	0.053	0.124	0.02	0.02	0.012	0.006	0.011	0.02	0.008	0.708	0.099	0.187	0.146	0.111	0.099	0.496	2.01	1.846	1.131	0.22	1.315	4.754	4.754	1.8	1.598	2.789	7.966	0.325	noBRIT	0.632	2.721	2
TCGA-25-2404	38	G3	IIIC	NO MACROSCOPIC DISEASE	1	1	1	29.01	Infiltrated	0.942	MES_consensus	6039.577	7176.999	7934.593	544.833	-179.172	771.17	7083.512	1428.068	1879.482	-2247.308	-209.384	3795.72	6830.8	5676.399	5676.399	881.183	2666.531	2957.526	6574.194	2666.531	4930.23	7882.019	7569.149	5553.283	10893.017	4144.855	6877.603	1.062	1.751	1.077	2.439	2.666	7.364	4.242	2.551	5.18	2.95	0.965	0.783	0.205	1.545	TCGA-25-2404	0.028	0.029	0.069	0.042	0.0	0.019	0.0	0.005	0.015	0.0	0.794	0.09	0.165	0.148	0.102	0.087	0.478	1.603	1.163	1.077	0.205	1.062	2.95	2.95	0.965	1.848	2.481	7.364	0.373	noBRIT	0.84	2.881	2
TCGA-25-2409	71	G3	IV	1-10 MM	0	1	1	26.97	Infiltrated	0.136	DIF_consensus	6660.328	8036.492	7356.893	940.349	-2262.568	988.548	6946.979	1553.693	3840.221	-2525.453	657.379	4289.388	7749.473	6077.013	6077.013	995.127	2672.669	3488.924	6980.583	2672.669	4261.862	7046.434	6776.015	5576.328	10947.235	4215.04	5684.798	1.034	1.014	1.516	2.463	3.436	6.906	4.368	2.245	5.198	3.703	1.167	2.009	0.465	1.597	TCGA-25-2409	0.022	0.139	0.108	0.117	0.0	0.015	0.0	0.009	0.025	0.0	0.566	0.098	0.171	0.162	0.098	0.096	0.471	1.919	0.485	1.516	0.465	1.034	3.703	3.703	1.167	1.65	2.25	6.906	0.371	other	0.834	0.786	1
TCGA-29-1693	72	G3	IIIC	>20 MM	1	0	0	101.72	Infiltrated	0.874	IMR_consensus	6289.082	6889.06	7870.592	653.614	-1197.365	1442.427	6569.597	1245.274	2013.736	-2107.541	-119.513	3605.108	7105.641	6074.807	6074.807	1090.852	2781.085	2805.202	6975.461	2781.085	4231.509	7628.146	7363.911	5319.1	10915.6	4115.628	6606.3	0.17	1.03	1.015	1.97	2.297	7.057	4.24	1.714	5.149	2.753	0.658	1.226	0.152	1.286	TCGA-29-1693	0.059	0.074	0.027	0.085	0.0	0.006	0.0	0.003	0.012	0.0	0.736	0.091	0.146	0.148	0.098	0.079	0.449	1.699	0.792	1.015	0.152	0.17	2.753	2.753	0.658	1.28	1.952	7.057	0.354	BRIT	0.771	2.682	0
TCGA-29-1697	62	G3	IIIC	>20 MM	0	1	1	31.18	Desert	0.188	PRO_consensus	3816.636	7591.334	7128.157	-2163.282	2238.81	-1395.879	6315.193	695.084	-600.283	-3474.153	-1676.854	880.735	3279.222	3568.181	3568.181	-397.77	57.374	1563.752	4359.731	57.374	1642.812	8476.564	8020.611	4977.047	10995.2	2466.326	3125.412	0.854	2.972	0.734	2.33	1.793	3.903	3.525	1.704	4.566	2.308	0.632	1.228	0.322	1.808	TCGA-29-1697	0.023	0.0	0.091	0.0	0.068	0.01	0.0	0.017	0.01	0.001	0.779	0.099	0.159	0.135	0.089	0.08	0.448	1.818	3.983	0.734	0.322	0.854	2.308	2.308	0.632	1.475	2.164	3.903	0.322	other	0.619	0.864	0
TCGA-29-1701	56	G3	IIIC	nan	1	1	1	16.92	Infiltrated	0.838	IMR_consensus	6094.263	7094.862	8083.45	453.513	3041.796	2826.705	6856.042	3590.767	3547.46	-1398.156	1057.614	4845.677	7102.173	5973.461	5973.461	1158.841	3337.536	3172.941	6828.88	3337.536	3010.657	7289.848	7074.025	5068.814	10989.57	4775.081	6137.228	1.094	2.562	1.033	2.74	2.695	6.218	4.041	1.99	4.764	3.058	2.08	0.937	0.111	1.484	TCGA-29-1701	0.009	0.013	0.033	0.034	0.016	0.007	0.015	0.013	0.007	0.0	0.852	0.095	0.157	0.152	0.096	0.081	0.462	1.988	2.237	1.033	0.111	1.094	3.058	3.058	2.08	1.178	1.566	6.218	0.298	BRIT	0.478	2.523	1
TCGA-29-1707	41	G3	IIC	NO MACROSCOPIC DISEASE	1	0	0	41.95	Infiltrated	0.894	IMR_consensus	7538.595	7367.626	8451.342	17.268	-2524.512	2175.402	8458.091	594.003	1051.216	-134.766	-174.254	4123.823	7710.401	6064.103	6064.103	1631.226	2686.801	3784.147	6942.277	2686.801	3851.776	8995.844	8073.796	6807.941	10953.56	4048.941	2941.088	0.775	0.591	0.973	1.862	2.139	4.967	4.675	1.843	5.86	3.229	1.698	1.88	0.194	1.654	TCGA-29-1707	0.013	0.034	0.0	0.319	0.0	0.012	0.057	0.015	0.012	0.0	0.537	0.097	0.177	0.126	0.108	0.061	0.5	1.908	0.4	0.973	0.194	0.775	3.229	3.229	1.698	1.764	1.68	4.967	0.465	BRIT	0.978	2.864	1
TCGA-29-1761	80	G3	IIIC	>20 MM	1	1	1	17.35	Infiltrated	0.814	IMR_consensus	6780.99	7243.91	7726.072	399.499	2566.636	1022.432	6017.418	3571.028	3997.839	-2070.967	1201.94	5340.194	7720.704	6581.259	6581.259	952.167	3841.772	4083.874	7426.65	3841.772	2597.243	7010.73	6618.474	4808.381	11115.101	4158.611	3475.821	0.644	2.122	0.843	2.463	2.599	4.435	4.0	2.211	5.021	2.519	1.52	0.911	0.136	1.206	TCGA-29-1761	0.0	0.006	0.03	0.05	0.0	0.066	0.012	0.017	0.014	0.0	0.805	0.095	0.146	0.155	0.088	0.076	0.453	1.628	1.822	0.843	0.136	0.644	2.519	2.519	1.52	0.758	1.198	4.435	0.289	BRIT	0.431	2.451	0
TCGA-29-1768	50	G3	IV	>20 MM	0	1	1	31.28	Infiltrated	0.248	MES_consensus	8067.224	6598.757	8234.593	1587.823	3441.47	2599.016	6494.302	4255.616	4969.718	-1771.061	2595.909	6150.484	9068.046	7516.409	7516.409	2036.449	5050.554	5068.913	8487.322	5050.554	5078.526	8077.123	7625.101	5535.95	11030.833	5008.155	8081.994	1.057	2.624	1.912	2.926	3.193	7.748	4.765	2.411	5.618	3.647	1.057	1.899	0.185	1.351	TCGA-29-1768	0.018	0.023	0.071	0.057	0.0	0.006	0.009	0.016	0.013	0.0	0.787	0.097	0.16	0.17	0.098	0.086	0.481	1.524	2.088	1.912	0.185	1.057	3.647	3.647	1.057	1.097	2.09	7.748	0.311	other	0.557	1.007	1
TCGA-29-1769	40	G3	IIIC	1-10 MM	1	0	0	22.97	Infiltrated	0.896	IMR_consensus	5383.748	7100.838	8749.259	509.308	830.158	2311.663	6758.732	1815.377	1874.549	-1771.403	49.284	4000.476	6068.065	5198.326	5198.326	898.785	2076.139	2589.67	5998.826	2076.139	3433.826	7600.843	7604.79	5624.777	11096.732	4235.918	5722.101	0.888	1.819	0.887	2.202	2.22	6.191	3.652	1.754	4.388	2.695	0.963	1.243	0.152	1.4	TCGA-29-1769	0.026	0.015	0.03	0.086	0.0	0.007	0.009	0.01	0.009	0.0	0.808	0.095	0.157	0.149	0.101	0.082	0.448	1.626	1.653	0.887	0.152	0.888	2.695	2.695	0.963	1.247	1.667	6.191	0.293	BRIT	0.454	2.669	0
TCGA-29-1774	82	G3	IIIC	>20 MM	0	0	0	17.31	Desert	0.15	PRO_consensus	2282.11	6645.15	6448.42	-2833.108	-1171.017	-2852.395	5281.032	-2952.157	-3777.625	-3711.361	-4393.629	-2877.056	1633.897	-1603.878	-1603.878	-2205.273	-2618.56	-2662.934	-1129.044	-2618.56	2200.691	4904.801	4422.375	2963.252	11016.62	2162.912	4341.342	1.083	1.572	0.439	0.938	0.637	5.853	1.402	0.345	2.081	1.703	1.291	0.294	0.07	1.697	TCGA-29-1774	0.008	0.0	0.006	0.083	0.0	0.014	0.017	0.01	0.008	0.021	0.833	0.089	0.16	0.12	0.079	0.077	0.442	0.949	2.146	0.439	0.07	1.083	1.703	1.703	1.291	1.244	2.667	5.853	0.113	other	0.013	0.521	1
TCGA-29-1776	63	G3	IIIC	>20 MM	0	0	0	11.83	Infiltrated	0.272	DIF_consensus	6365.192	6747.098	7948.114	-30.285	166.14	908.053	5832.929	29.73	-75.254	-2773.237	-1271.465	2814.111	7039.464	4337.777	4337.777	490.761	2739.755	1802.67	5247.41	2739.755	3899.448	7297.259	7205.827	4905.571	11026.597	3327.277	5636.864	1.235	1.839	0.853	1.779	1.722	6.798	3.544	1.377	4.344	2.803	0.686	0.663	0.096	1.528	TCGA-29-1776	0.019	0.008	0.043	0.05	0.0	0.01	0.003	0.008	0.016	0.0	0.842	0.107	0.161	0.138	0.092	0.073	0.468	1.515	1.481	0.853	0.096	1.235	2.803	2.803	0.686	1.414	2.079	6.798	0.229	other	0.159	0.974	0
TCGA-29-1778	77	G3	IIIC	NO MACROSCOPIC DISEASE	0	0	0	14.92	Infiltrated	0.152	DIF_consensus	6392.523	8546.493	8214.111	1226.735	70.799	621.07	6525.842	3017.517	4860.307	-2910.98	1903.804	5589.124	7017.711	7469.436	7469.436	1205.582	3542.214	4215.834	8396.316	3542.214	3668.005	7441.341	7158.587	5762.6	10964.601	4475.262	3163.643	1.68	1.952	1.64	3.094	3.865	5.595	5.138	3.068	5.842	3.365	1.782	2.018	0.343	1.821	TCGA-29-1778	0.018	0.015	0.106	0.0	0.016	0.012	0.0	0.008	0.024	0.014	0.786	0.097	0.177	0.17	0.092	0.08	0.472	2.22	1.365	1.64	0.343	1.68	3.365	3.365	1.782	1.522	2.633	5.595	0.475	other	0.982	0.949	1
TCGA-29-1781	69	G3	IIIC	NO MACROSCOPIC DISEASE	1	0	0	8.38	Infiltrated	0.864	IMR_consensus	7147.166	6845.56	8557.28	2246.621	5446.401	2139.827	6869.862	6284.227	6506.12	-1933.244	3981.464	7788.631	8191.636	8452.401	8452.401	2550.829	5558.041	6019.957	9268.864	5558.041	3972.752	8070.787	7655.232	5802.75	11001.642	5747.007	3886.734	2.726	3.908	1.813	4.239	4.344	5.096	5.795	4.506	6.75	4.338	1.513	1.277	0.246	1.817	TCGA-29-1781	0.026	0.015	0.063	0.216	0.0	0.014	0.018	0.044	0.013	0.0	0.59	0.107	0.179	0.175	0.105	0.09	0.491	2.709	3.252	1.813	0.246	2.726	4.338	4.338	1.513	1.773	2.084	5.096	0.436	BRIT	0.957	2.752	1
TCGA-29-1783	58	G3	IIIC	1-10 MM	0	0	0	7.23	Infiltrated	0.05	IMR_consensus	6034.427	8675.003	5694.638	799.186	243.498	1742.421	6935.288	703.685	1016.121	-2371.037	-696.929	3942.595	7148.996	5650.251	5650.251	695.722	2954.675	2532.419	6475.29	2954.675	3503.987	6442.674	6721.482	5315.706	10950.573	4022.952	5369.37	1.414	2.04	1.027	2.241	2.366	6.353	4.257	2.805	5.222	3.794	2.064	1.13	0.165	1.774	TCGA-29-1783	0.017	0.085	0.079	0.01	0.036	0.011	0.0	0.008	0.025	0.0	0.729	0.097	0.178	0.137	0.104	0.093	0.472	2.162	1.488	1.027	0.165	1.414	3.794	3.794	2.064	1.703	2.136	6.353	0.254	other	0.251	0.426	1
TCGA-29-1784	55	G3	IIIC	NO MACROSCOPIC DISEASE	1	0	0	5.36	Infiltrated	0.932	IMR_consensus	7710.623	6987.679	8481.788	1551.158	2758.095	1560.09	6886.609	3885.697	4389.965	-2374.519	1613.261	6483.533	8619.14	7688.684	7688.684	1800.263	5202.105	4569.287	8604.437	5202.105	3414.851	7631.272	7302.108	5480.579	11069.701	5017.215	2709.214	2.061	2.766	1.143	3.183	3.367	4.336	5.326	3.389	6.373	3.821	1.461	1.048	0.182	1.961	TCGA-29-1784	0.018	0.004	0.088	0.074	0.0	0.014	0.0	0.017	0.018	0.0	0.767	0.107	0.171	0.158	0.099	0.08	0.486	2.573	2.153	1.143	0.182	2.061	3.821	3.821	1.461	1.394	1.787	4.336	0.345	BRIT	0.731	2.822	0
TCGA-29-1785	55	G3	IIIC	>20 MM	0	1	1	36.27	Infiltrated	0.114	IMR_consensus	7814.776	8064.691	6720.354	1967.071	4133.971	1739.419	7094.161	6104.911	6570.875	-1826.78	3789.664	7394.261	9120.253	8486.619	8486.619	1955.426	5681.748	5998.388	9318.854	5681.748	4440.826	8253.154	7490.009	6459.528	10996.79	5327.346	4308.403	0.986	3.358	2.055	4.129	4.311	5.612	5.833	3.943	6.688	3.482	0.965	1.855	0.374	1.48	TCGA-29-1785	0.018	0.014	0.08	0.078	0.0	0.005	0.045	0.023	0.013	0.0	0.725	0.107	0.168	0.179	0.1	0.087	0.482	2.457	2.753	2.055	0.374	0.986	3.482	3.482	0.965	1.378	1.77	5.612	0.524	other	0.994	0.907	1
TCGA-29-2427	60	G3	IIIC	>20 MM	1	0	0	62.42	Infiltrated	0.926	IMR_consensus	8841.644	6851.273	8618.451	2943.502	5749.124	2340.77	6870.823	6358.653	7751.715	-1884.81	4869.405	8092.979	10152.112	8892.705	8892.705	2476.874	6621.533	6419.96	9788.818	6621.533	4463.281	8324.387	7736.789	6590.884	10891.928	5548.668	5341.355	1.347	3.882	2.393	4.142	4.731	6.728	5.958	3.628	6.802	4.082	1.03	2.077	0.548	1.862	TCGA-29-2427	0.011	0.026	0.103	0.108	0.0	0.015	0.021	0.042	0.011	0.0	0.663	0.114	0.172	0.191	0.103	0.099	0.49	2.372	3.331	2.393	0.548	1.347	4.082	4.082	1.03	1.353	1.923	6.728	0.38	BRIT	0.862	2.848	0
TCGA-29-A5NZ	66	G3	IIIC	nan	0	1	1	35.75	Desert	0.09	PRO_consensus	3447.951	7787.363	6070.537	-811.788	-3481.221	-866.225	6211.298	-2160.472	-897.526	-3281.532	-2628.285	1499.518	3459.801	3384.488	3384.488	-225.409	663.546	410.258	3932.698	663.546	4098.146	6085.494	6273.527	4414.508	10729.703	3528.181	6804.129	0.878	0.838	0.477	1.369	1.948	7.868	3.628	2.416	4.533	3.514	1.491	0.671	0.24	2.024	TCGA-29-A5NZ	0.013	0.034	0.027	0.041	0.0	0.012	0.093	0.0	0.021	0.005	0.754	0.081	0.192	0.132	0.099	0.096	0.457	1.742	0.364	0.477	0.24	0.878	3.514	3.514	1.491	1.47	2.602	7.868	0.286	other	0.414	0.568	2
TCGA-30-1714	68	G3	IV	1-10 MM	0	1	1	38.05	Desert	0.114	DIF_consensus	5524.51	8041.734	7360.197	-1819.206	-2009.785	719.586	6612.925	-927.693	-1000.086	-1655.474	-1690.005	768.979	6685.842	2129.643	2129.643	-708.44	1185.593	263.641	2789.873	1185.593	2774.347	5291.805	3865.838	4411.692	11035.813	3091.268	2793.321	1.013	0.729	0.896	1.103	1.086	4.52	2.237	0.366	3.054	1.442	1.027	1.553	0.124	1.169	TCGA-30-1714	0.007	0.003	0.016	0.003	0.041	0.009	0.029	0.003	0.005	0.022	0.863	0.102	0.151	0.123	0.084	0.069	0.432	1.319	0.806	0.896	0.124	1.013	1.442	1.442	1.027	1.154	1.275	4.52	0.238	other	0.189	0.574	1
TCGA-30-1718	44	G3	IIIC	1-10 MM	1	1	1	51.88	Infiltrated	0.902	MES_consensus	6116.868	8157.703	7772.429	697.184	685.513	1571.717	7150.764	1659.75	1860.616	-2105.829	629.45	4330.064	6905.4	6007.709	6007.709	1209.96	2809.076	3128.957	6938.886	2809.076	4242.44	7516.011	7323.056	5594.986	11118.926	4195.801	6628.775	1.35	1.952	1.24	2.362	2.446	7.165	4.305	1.881	5.153	2.917	0.791	1.398	0.197	1.451	TCGA-30-1718	0.007	0.015	0.057	0.015	0.0	0.012	0.048	0.009	0.01	0.063	0.764	0.1	0.171	0.146	0.1	0.08	0.467	1.675	1.569	1.24	0.197	1.35	2.917	2.917	0.791	1.121	2.233	7.165	0.314	noBRIT	0.573	2.708	1
TCGA-30-1853	58	G3	IIIC	1-10 MM	0	1	1	36.24	Desert	0.034	PRO_consensus	3826.352	8952.716	7183.76	-1062.202	-3745.409	-3140.109	5822.522	-4002.181	-3872.784	-3228.586	-4406.557	-1658.73	3971.174	-371.072	-371.072	-1358.586	-1433.297	-2302.115	104.731	-1433.297	1588.946	5592.988	5297.798	4060.166	11056.043	2254.738	4317.98	0.462	0.177	0.065	0.148	0.156	4.348	1.258	0.399	1.973	1.408	0.155	0.624	0.051	0.776	TCGA-30-1853	0.079	0.0	0.0	0.102	0.0	0.004	0.0	0.001	0.002	0.0	0.812	0.089	0.136	0.121	0.066	0.054	0.421	0.815	0.214	0.065	0.051	0.462	1.408	1.408	0.155	1.087	1.743	4.348	0.043	other	0.003	0.138	1
TCGA-30-1857	64	G3	IV	nan	0	1	1	0.26	Infiltrated	0.146	MES_consensus	7076.427	7741.701	7674.47	569.129	1319.873	2360.942	7468.128	1793.938	2387.336	-1932.698	708.329	4819.614	8237.977	6117.9	6117.9	1279.815	3788.909	3588.968	6988.602	3788.909	4531.357	6779.741	6318.269	5770.017	10816.763	4358.808	7016.695	1.004	2.18	1.323	2.316	2.475	7.679	4.129	2.175	5.01	3.28	2.275	1.4	0.267	1.483	TCGA-30-1857	0.005	0.009	0.0	0.197	0.0	0.009	0.071	0.017	0.01	0.0	0.682	0.101	0.178	0.142	0.096	0.083	0.481	1.932	1.916	1.323	0.267	1.004	3.28	3.28	2.275	1.43	2.192	7.679	0.229	other	0.157	0.646	2
TCGA-31-1953	52	G3	IIIC	nan	0	0	0	6.7	Infiltrated	0.202	IMR_consensus	8140.088	7998.87	7107.855	2577.566	1197.304	1727.387	7890.947	5329.554	7114.898	-1730.461	3547.185	7028.167	9000.994	8191.106	8191.106	2385.276	5233.722	5783.579	9135.497	5233.722	5621.369	8260.539	7623.04	6456.664	10914.211	5251.443	6510.321	0.733	2.611	2.79	4.175	4.94	7.54	5.844	3.78	6.498	4.922	3.887	2.791	0.519	2.233	TCGA-31-1953	0.018	0.05	0.108	0.113	0.0	0.026	0.028	0.018	0.028	0.0	0.612	0.101	0.189	0.181	0.116	0.1	0.512	2.972	1.74	2.79	0.519	0.733	4.922	4.922	3.887	1.819	2.757	7.54	0.557	other	0.997	1.174	2
TCGA-57-1586	66	G3	IIIC	11-20 MM	0	0	0	22.31	Infiltrated	0.098	DIF_consensus	6280.692	8074.747	6245.63	374.807	-1870.914	-261.613	7215.607	-1235.442	-750.69	-3482.349	-2402.102	2841.718	6972.376	4743.357	4743.357	296.025	2174.525	1449.689	5648.174	2174.525	2617.529	7852.495	6775.722	5836.275	11087.205	3399.512	2013.495	1.278	1.314	0.811	1.567	1.769	4.511	3.904	2.324	5.02	2.992	1.078	0.963	0.391	2.005	TCGA-57-1586	0.016	0.008	0.053	0.0	0.024	0.017	0.001	0.004	0.013	0.024	0.84	0.107	0.173	0.126	0.09	0.075	0.465	1.937	0.728	0.811	0.391	1.278	2.992	2.992	1.078	1.66	1.916	4.511	0.219	other	0.129	0.509	1
TCGA-57-1993	56	G3	IIIC	NO MACROSCOPIC DISEASE	0	0	0	25.07	Infiltrated	0.066	DIF_consensus	4871.857	8382.833	6740.773	-34.437	-3781.426	-2009.413	7004.315	-2816.914	-1747.826	-3451.691	-3928.342	542.265	5482.126	1565.217	1565.217	-109.103	-471.13	-540.879	2324.815	-471.13	3811.658	7212.827	7085.744	5295.268	10787.466	3226.134	3690.728	1.616	0.722	0.595	1.104	1.568	5.548	2.85	2.483	3.694	3.693	1.314	1.062	0.191	1.992	TCGA-57-1993	0.016	0.053	0.053	0.023	0.018	0.031	0.0	0.002	0.024	0.0	0.78	0.103	0.179	0.124	0.1	0.097	0.476	1.937	0.584	0.595	0.191	1.616	3.693	3.693	1.314	2.359	2.219	5.548	0.143	other	0.025	0.338	1
TCGA-59-2348	59	G3	IIIC	nan	1	0	0	180.07	Infiltrated	0.8	DIF_consensus	5252.282	7397.265	7590.733	80.977	-791.536	-346.913	7104.488	137.664	658.152	-3024.996	-1005.815	2967.4	5415.499	4654.487	4654.487	806.097	1861.069	1824.584	5445.71	1861.069	4419.032	7795.86	7541.466	5323.47	10792.088	3508.755	4811.917	0.971	1.44	0.895	1.888	2.137	5.915	3.867	2.111	4.888	3.8	0.618	1.109	0.218	1.726	TCGA-59-2348	0.021	0.05	0.043	0.131	0.0	0.009	0.0	0.012	0.022	0.0	0.711	0.097	0.174	0.138	0.097	0.089	0.469	1.823	0.983	0.895	0.218	0.971	3.8	3.8	0.618	2.067	2.747	5.915	0.273	noBRIT	0.343	2.396	1
TCGA-59-2350	44	G3	IV	1-10 MM	0	1	1	22.31	Infiltrated	0.124	PRO_consensus	5558.232	7115.999	6626.806	30.751	-275.033	-170.714	7396.131	-384.117	-432.34	-2874.9	-1618.067	2415.522	5981.033	4656.246	4656.246	194.472	1771.253	1767.883	5468.798	1771.253	3843.646	8354.21	7778.216	5226.29	11066.661	3462.583	4553.026	1.009	1.792	0.719	1.739	1.712	5.128	3.872	2.218	4.981	3.078	1.027	0.918	0.221	1.548	TCGA-59-2350	0.023	0.022	0.102	0.009	0.023	0.017	0.0	0.008	0.018	0.008	0.771	0.101	0.169	0.131	0.095	0.078	0.476	1.465	1.932	0.719	0.221	1.009	3.078	3.078	1.027	1.269	2.04	5.128	0.233	other	0.172	0.594	0
TCGA-59-2351	51	G3	IIIC	1-10 MM	1	0	0	116.04	Infiltrated	0.874	IMR_consensus	6431.318	7213.902	7311.154	1106.035	22.504	748.714	7259.388	1887.394	3427.907	-2495.965	585.092	4918.532	7444.328	6536.663	6536.663	1320.651	3811.34	3433.047	7350.82	3811.34	4644.705	7319.956	6841.585	5840.753	11192.98	4564.015	4642.176	2.481	1.903	1.178	2.715	3.382	6.285	4.813	3.082	5.636	4.026	1.211	1.353	0.208	2.078	TCGA-59-2351	0.027	0.032	0.093	0.008	0.029	0.014	0.0	0.007	0.022	0.015	0.753	0.107	0.186	0.147	0.101	0.089	0.49	2.105	1.164	1.178	0.208	2.481	4.026	4.026	1.211	1.272	2.734	6.285	0.329	BRIT	0.655	2.653	1
TCGA-59-2352	78	G3	IIIC	nan	0	1	1	9.4	Infiltrated	0.122	PRO_consensus	6479.05	7784.785	6707.269	718.046	1399.574	753.262	6881.679	2106.044	1626.143	-3227.549	276.864	4712.032	7073.865	6673.941	6673.941	710.773	3157.391	3702.735	7638.168	3157.391	3878.372	8404.9	7791.77	6091.402	10791.534	4330.321	4484.393	2.094	2.751	1.363	3.016	2.841	6.46	5.04	3.388	5.944	3.588	1.488	1.446	0.229	1.759	TCGA-59-2352	0.017	0.018	0.081	0.029	0.0	0.014	0.004	0.017	0.028	0.036	0.756	0.1	0.185	0.142	0.102	0.078	0.478	1.64	3.073	1.363	0.229	2.094	3.588	3.588	1.488	1.472	2.502	6.46	0.417	other	0.935	0.803	2
TCGA-59-2354	63	G3	IIIC	1-10 MM	0	1	1	34.37	Infiltrated	0.236	MES_consensus	6826.877	7179.692	7031.101	1130.183	701.957	1377.403	6964.233	3031.661	4617.278	-2580.667	1315.723	5421.359	7852.55	6734.304	6734.304	1341.87	4191.395	4046.558	7655.242	4191.395	4924.559	8004.192	7565.237	5739.037	10884.415	4564.374	7152.238	2.066	2.515	1.848	3.411	4.049	8.216	5.034	3.294	5.895	3.998	2.197	1.637	0.522	2.252	TCGA-59-2354	0.016	0.032	0.073	0.015	0.019	0.017	0.021	0.011	0.02	0.0	0.777	0.094	0.184	0.17	0.106	0.097	0.491	2.63	1.779	1.848	0.522	2.066	3.998	3.998	2.197	1.954	2.703	8.216	0.456	other	0.973	1.144	2
TCGA-59-2355	58	G3	IV	>20 MM	0	1	1	2.14	Infiltrated	0.132	DIF_consensus	6348.16	8257.639	7870.727	-60.542	599.35	1273.418	6918.376	2146.05	2432.016	-2421.575	97.266	4217.809	6943.804	5976.033	5976.033	724.985	2764.014	3201.241	6816.5	2764.014	3566.471	7436.94	7122.599	5509.591	11053.132	3808.809	4892.79	1.07	1.954	0.873	2.576	2.727	6.133	4.15	2.616	5.055	2.714	0.752	0.792	0.135	1.46	TCGA-59-2355	0.009	0.04	0.033	0.026	0.028	0.012	0.019	0.008	0.012	0.0	0.811	0.097	0.167	0.152	0.093	0.084	0.46	1.728	1.363	0.873	0.135	1.07	2.714	2.714	0.752	1.278	2.096	6.133	0.39	other	0.886	0.797	2
TCGA-59-2363	40	G3	IIIA	NO MACROSCOPIC DISEASE	0	0	0	5.42	Desert	0.15	PRO_consensus	3498.353	7254.813	6943.631	-752.26	-824.939	464.355	7217.332	-1425.266	-2416.145	-3077.024	-3062.565	510.198	3385.423	2494.517	2494.517	-717.354	137.473	-68.226	3253.908	137.473	2232.126	6015.117	6214.112	4450.997	11189.086	3094.311	3910.876	1.155	1.652	0.425	1.398	0.985	5.796	2.881	1.09	4.03	2.346	1.397	0.632	0.197	1.421	TCGA-59-2363	0.02	0.023	0.027	0.017	0.022	0.014	0.0	0.006	0.018	0.01	0.843	0.099	0.177	0.115	0.099	0.074	0.444	1.04	2.172	0.425	0.197	1.155	2.346	2.346	1.397	1.539	2.214	5.796	0.229	other	0.159	0.657	1
TCGA-59-A5PD	55	G3	IC	nan	1	1	1	20.5	Desert	0.824	PRO_consensus	3731.805	6525.066	6611.143	-395.376	-2520.696	246.636	7761.93	-624.287	-97.11	-2805.112	-1620.02	2253.191	4436.388	3412.135	3412.135	237.407	987.252	1138.656	4110.712	987.252	3562.384	4658.148	3800.982	3877.703	11106.327	3568.791	4011.971	1.202	0.829	0.675	1.64	1.856	5.852	3.329	2.175	4.317	2.982	0.708	0.556	0.162	1.548	TCGA-59-A5PD	0.012	0.022	0.046	0.0	0.022	0.015	0.048	0.0	0.009	0.069	0.757	0.097	0.185	0.113	0.094	0.073	0.472	1.884	0.432	0.675	0.162	1.202	2.982	2.982	0.708	1.519	1.619	5.852	0.328	noBRIT	0.651	2.522	1
TCGA-61-1725	40	G3	IIIC	11-20 MM	1	0	0	31.41	Infiltrated	0.942	IMR_consensus	7100.096	7103.271	8625.764	921.182	66.219	1297.691	6173.883	1983.316	2935.688	-2136.217	212.296	4306.216	8161.93	6290.641	6290.641	1087.901	3967.124	3289.73	7111.913	3967.124	3649.248	7190.994	6609.507	4970.674	11226.257	4496.842	5954.769	0.598	1.456	0.874	2.165	2.53	6.365	4.121	1.978	5.108	2.712	0.605	0.809	0.115	1.307	TCGA-61-1725	0.006	0.004	0.029	0.088	0.0	0.005	0.036	0.009	0.007	0.0	0.817	0.093	0.15	0.152	0.096	0.077	0.456	1.224	0.991	0.874	0.115	0.598	2.712	2.712	0.605	1.129	1.956	6.365	0.32	BRIT	0.607	2.819	0
TCGA-61-1728	59	G3	IV	1-10 MM	0	0	0	27.86	Desert	0.122	DIF_consensus	5044.136	8243.749	6621.905	-1056.198	-2839.962	-230.271	7028.389	-957.449	-227.338	-2256.258	-2272.318	1635.19	6011.305	3562.16	3562.16	-42.907	1434.468	842.018	4402.364	1434.468	3309.599	5633.843	4350.389	4380.578	11031.245	3179.726	3669.903	0.506	0.787	0.698	1.495	1.779	5.555	3.208	1.3	4.223	2.831	0.905	1.132	0.15	1.669	TCGA-61-1728	0.013	0.0	0.01	0.142	0.0	0.017	0.036	0.007	0.011	0.0	0.763	0.096	0.163	0.125	0.092	0.073	0.463	1.486	0.358	0.698	0.15	0.506	2.831	2.831	0.905	1.633	2.017	5.555	0.272	other	0.338	0.634	0
TCGA-61-1733	71	G3	IIIC	NO MACROSCOPIC DISEASE	0	0	0	31.77	Infiltrated	0.128	PRO_consensus	4955.632	6634.559	6087.286	717.208	-95.586	767.569	5974.221	-141.855	22.463	-2029.951	-2207.093	1834.382	5816.553	3434.293	3434.293	18.871	1038.211	781.533	4276.978	1038.211	2976.729	7453.297	7234.426	4953.272	10770.171	3872.809	6464.158	0.74	1.823	0.574	1.803	1.876	6.991	3.284	1.717	4.09	2.582	0.716	0.875	0.12	1.42	TCGA-61-1733	0.089	0.134	0.025	0.035	0.009	0.006	0.0	0.0	0.016	0.0	0.686	0.092	0.167	0.129	0.095	0.09	0.45	1.509	1.343	0.574	0.12	0.74	2.582	2.582	0.716	1.337	2.034	6.991	0.2	other	0.088	0.566	2
TCGA-61-1736	45	G3	IIIC	nan	0	1	1	48.76	Infiltrated	0.07	DIF_consensus	5782.135	8539.723	6607.448	774.811	-1838.123	-249.051	7695.926	-113.457	1349.719	-2199.247	-1035.744	2409.988	6328.748	4286.986	4286.986	803.954	1722.723	1954.046	5072.387	1722.723	4621.396	7279.305	7384.453	5681.117	11149.834	3593.597	3500.861	0.995	1.259	1.166	1.996	2.658	5.949	3.66	1.568	4.532	3.539	1.525	1.41	0.366	1.859	TCGA-61-1736	0.044	0.034	0.056	0.014	0.018	0.015	0.0	0.001	0.01	0.0	0.809	0.098	0.176	0.146	0.105	0.085	0.483	1.839	0.625	1.166	0.366	0.995	3.539	3.539	1.525	1.738	2.896	5.949	0.296	other	0.468	0.527	2
TCGA-61-1737	42	G3	IV	1-10 MM	1	0	0	44.81	Infiltrated	0.928	MES_consensus	6448.953	7543.252	8377.074	-72.704	-194.31	2138.379	6113.559	756.837	1124.019	-2138.28	-517.717	3821.85	7194.832	5523.035	5523.035	1030.53	2964.024	2588.1	6393.016	2964.024	4525.204	7129.754	7202.514	4439.45	11073.428	4015.374	7392.153	0.634	1.85	1.031	2.274	2.441	8.382	4.269	2.019	5.303	3.81	2.199	0.908	0.169	1.574	TCGA-61-1737	0.012	0.041	0.056	0.0	0.008	0.012	0.019	0.007	0.01	0.059	0.776	0.101	0.185	0.127	0.103	0.093	0.477	1.908	1.502	1.031	0.169	0.634	3.81	3.81	2.199	1.441	2.777	8.382	0.29	noBRIT	0.437	2.748	2
TCGA-61-1738	60	G3	IIIC	1-10 MM	0	1	1	35.78	Infiltrated	0.15	IMR_consensus	7381.609	7703.156	7399.361	580.562	336.6	1267.999	6613.083	936.257	462.881	-1621.156	-1305.548	3385.962	8500.408	5494.736	5494.736	1100.607	3165.115	2574.098	6448.167	3165.115	2717.096	8661.746	8324.81	5976.954	10817.605	3838.025	2826.314	1.135	1.595	0.765	1.837	1.646	3.656	4.286	1.557	5.657	2.494	1.171	0.921	0.116	1.26	TCGA-61-1738	0.011	0.024	0.026	0.059	0.0	0.039	0.033	0.009	0.011	0.0	0.788	0.106	0.147	0.134	0.097	0.078	0.457	1.503	1.522	0.765	0.116	1.135	2.494	2.494	1.171	1.508	1.492	3.656	0.279	other	0.374	0.715	1
TCGA-61-1741	76	G3	IIIB	>20 MM	0	1	1	33.64	Infiltrated	0.104	PRO_consensus	5905.364	8091.405	6520.746	92.574	-1459.717	736.929	6535.38	-652.537	-163.772	-3443.851	-1588.415	3769.991	6374.044	5552.587	5552.587	408.842	2485.111	2130.098	6434.55	2485.111	3080.034	8404.363	7631.177	5749.928	11089.356	3765.379	3957.913	2.563	1.694	0.975	2.064	2.285	5.548	4.608	3.325	5.65	3.54	1.305	1.164	0.182	2.235	TCGA-61-1741	0.023	0.015	0.085	0.0	0.028	0.021	0.0	0.005	0.026	0.008	0.787	0.095	0.184	0.143	0.097	0.087	0.476	2.203	1.106	0.975	0.182	2.563	3.54	3.54	1.305	1.387	2.585	5.548	0.274	other	0.347	0.589	1
TCGA-61-1900	51	G3	IIIB	NO MACROSCOPIC DISEASE	1	0	0	5.78	Desert	0.834	PRO_consensus	4075.703	7227.543	7126.361	-1498.406	2980.368	-1152.535	5115.748	-254.448	-2725.246	-4033.607	-2923.342	196.558	4158.663	1905.355	1905.355	-977.099	-93.555	-145.926	2600.276	-93.555	3164.688	5025.253	4096.687	2647.078	11147.499	2805.979	4079.077	1.155	3.172	0.36	1.874	0.992	5.949	2.691	1.874	3.733	2.094	1.597	0.131	0.134	1.562	TCGA-61-1900	0.015	0.004	0.033	0.024	0.017	0.018	0.0	0.031	0.009	0.007	0.842	0.106	0.174	0.114	0.086	0.078	0.446	1.555	4.658	0.36	0.134	1.155	2.094	2.094	1.597	1.505	2.59	5.949	0.133	noBRIT	0.02	2.32	1
TCGA-61-1907	63	G3	IIIC	11-20 MM	1	0	0	31.28	Infiltrated	0.956	IMR_consensus	8325.18	6462.958	9256.558	1799.729	3981.599	2811.027	7479.866	5177.723	5822.065	-1500.072	3227.846	7180.893	9350.276	7943.045	7943.045	2091.212	5815.021	5402.784	8815.098	5815.021	3252.843	8963.965	7987.905	6400.137	11032.313	5759.885	2336.409	1.49	3.071	1.54	3.536	3.805	2.713	5.471	3.133	6.259	3.521	1.928	1.421	0.156	1.606	TCGA-61-1907	0.01	0.026	0.074	0.003	0.023	0.006	0.009	0.018	0.024	0.006	0.801	0.101	0.179	0.165	0.103	0.078	0.471	2.481	2.568	1.54	0.156	1.49	3.521	3.521	1.928	1.308	1.883	2.713	0.394	BRIT	0.894	2.942	0
TCGA-61-1910	56	G3	IIC	1-10 MM	1	0	0	37.03	Desert	0.762	DIF_consensus	4941.068	7566.205	6446.134	-655.836	-3369.145	-629.441	7074.343	-2296.165	-2081.54	-2933.19	-3141.096	1528.583	4829.425	4244.46	4244.46	123.429	880.012	805.412	5045.143	880.012	3441.618	7746.169	6924.292	5095.553	11161.205	2685.523	3413.446	0.488	0.513	0.495	0.883	0.942	5.21	3.467	1.515	4.387	3.09	0.983	0.596	0.221	1.523	TCGA-61-1910	0.009	0.0	0.025	0.122	0.0	0.01	0.072	0.002	0.009	0.0	0.752	0.095	0.171	0.109	0.094	0.067	0.46	1.559	0.449	0.495	0.221	0.488	3.09	3.09	0.983	1.186	2.353	5.21	0.177	noBRIT	0.054	2.185	1
TCGA-61-1911	55	G3	IIA	nan	0	0	0	42.48	Infiltrated	0.098	IMR_consensus	6878.849	7916.433	7662.524	2018.864	5478.602	2481.559	7443.506	6755.482	7106.191	-1682.516	4261.716	7611.97	8002.41	8345.028	8345.028	2358.049	4941.099	6128.197	9082.813	4941.099	4108.016	7983.548	7505.695	6667.109	10814.266	5856.291	3599.219	2.018	3.857	2.327	4.365	4.523	4.786	5.525	3.966	6.356	3.517	1.218	2.059	0.343	1.712	TCGA-61-1911	0.02	0.053	0.073	0.124	0.0	0.009	0.0	0.044	0.02	0.0	0.656	0.104	0.178	0.185	0.102	0.093	0.472	2.897	3.036	2.327	0.343	2.018	3.517	3.517	1.218	1.757	1.775	4.786	0.553	other	0.997	0.899	1
TCGA-61-1914	65	G3	IIIC	>20 MM	1	0	0	56.57	Infiltrated	0.904	IMR_consensus	6425.898	7072.78	8152.052	382.554	-584.596	2236.143	6614.517	1145.109	1405.732	-1909.803	-712.342	4301.227	7371.678	6557.401	6557.401	1065.975	3508.562	2738.751	7493.555	3508.562	3413.759	7109.83	7113.119	4479.701	10968.7	4361.807	4518.039	0.911	1.345	0.571	1.965	2.047	5.379	4.48	2.056	5.643	3.247	1.338	0.99	0.081	1.278	TCGA-61-1914	0.013	0.0	0.054	0.117	0.0	0.005	0.021	0.009	0.008	0.0	0.773	0.104	0.148	0.143	0.097	0.077	0.469	1.676	1.109	0.571	0.081	0.911	3.247	3.247	1.338	1.162	1.957	5.379	0.272	BRIT	0.335	2.664	0
TCGA-61-1995	43	G3	IIIC	1-10 MM	0	0	0	2.0	Infiltrated	0.066	DIF_consensus	6217.623	8309.844	6445.865	1225.286	-762.82	-319.574	7018.68	-236.773	1397.36	-2754.159	-584.265	3730.167	7326.841	4815.41	4815.41	1027.162	2582.514	2067.351	5592.473	2582.514	3578.277	6767.16	6289.305	5659.14	11072.564	4050.85	3406.391	1.064	1.833	1.112	2.057	2.845	5.518	4.177	2.519	5.037	4.299	2.117	1.158	0.332	2.165	TCGA-61-1995	0.02	0.034	0.094	0.0	0.045	0.016	0.0	0.006	0.03	0.0	0.756	0.097	0.204	0.144	0.101	0.095	0.493	2.793	1.199	1.112	0.332	1.064	4.299	4.299	2.117	1.886	2.194	5.518	0.186	other	0.065	0.389	1
TCGA-61-1998	48	G3	IIIC	1-10 MM	0	0	0	5.52	Infiltrated	0.174	MES_consensus	5610.674	8146.285	6773.643	328.228	-3500.021	1273.568	7166.269	-315.173	1157.107	-1547.545	-1594.015	2193.73	6520.372	3824.437	3824.437	600.904	2145.368	1320.916	4634.839	2145.368	4391.634	6185.786	5432.164	4695.159	11092.316	3928.082	6153.977	1.098	0.503	0.713	1.742	2.381	7.344	3.417	1.892	4.181	3.708	1.568	1.085	0.135	1.843	TCGA-61-1998	0.018	0.026	0.067	0.044	0.003	0.012	0.0	0.003	0.019	0.0	0.808	0.088	0.175	0.124	0.106	0.093	0.477	1.741	0.397	0.713	0.135	1.098	3.708	3.708	1.568	1.561	2.908	7.344	0.287	other	0.42	0.787	3
TCGA-61-2000	67	G3	IIIC	NO MACROSCOPIC DISEASE	1	0	0	14.49	Infiltrated	0.802	IMR_consensus	7415.725	7207.446	7651.061	176.12	-1963.622	1860.973	7119.392	2694.129	3820.718	-1493.989	888.421	3986.512	8402.154	5054.351	5054.351	963.02	3585.519	3203.17	5870.14	3585.519	3828.385	7351.104	7100.793	5757.811	11176.536	4755.318	5020.694	0.622	0.837	1.251	2.62	3.195	6.002	3.939	1.811	4.738	2.79	1.516	1.691	0.203	1.319	TCGA-61-2000	0.008	0.077	0.009	0.136	0.0	0.017	0.01	0.009	0.026	0.0	0.709	0.104	0.168	0.144	0.102	0.074	0.468	1.553	0.394	1.251	0.203	0.622	2.79	2.79	1.516	1.319	1.857	6.002	0.581	BRIT	0.998	2.759	1
TCGA-61-2002	46	G3	IIIC	11-20 MM	0	0	0	17.97	Infiltrated	0.19	IMR_consensus	8360.036	7874.141	8143.709	1737.401	4031.41	3736.396	7491.953	5402.452	5456.895	-1734.839	2917.466	6994.629	9410.569	8244.592	8244.592	2114.486	5926.429	5594.045	9160.954	5926.429	4744.563	7778.534	6766.788	5515.04	10994.697	5430.634	7154.774	1.19	3.455	1.685	3.978	4.008	7.576	5.799	3.268	6.818	3.812	2.475	1.382	0.159	1.779	TCGA-61-2002	0.029	0.031	0.054	0.077	0.0	0.012	0.0	0.028	0.033	0.0	0.736	0.098	0.197	0.152	0.108	0.086	0.491	2.362	2.728	1.685	0.159	1.19	3.812	3.812	2.475	1.933	2.082	7.576	0.51	other	0.992	1.088	1
TCGA-61-2009	65	G3	IIIC	11-20 MM	0	0	0	39.82	Infiltrated	0.138	MES_consensus	6067.926	8019.285	7199.285	364.414	1873.882	1663.096	6669.828	2749.269	3463.066	-2218.145	489.44	4453.203	7057.081	5791.534	5791.534	1001.61	3556.652	2970.985	6719.026	3556.652	3829.439	6449.672	5980.638	4513.383	10953.001	4663.787	7368.239	0.448	2.438	0.965	2.754	2.997	7.868	4.109	2.257	5.002	3.27	1.984	0.917	0.147	1.726	TCGA-61-2009	0.008	0.021	0.047	0.051	0.0	0.011	0.045	0.011	0.008	0.0	0.798	0.092	0.164	0.152	0.098	0.092	0.465	2.105	2.066	0.965	0.147	0.448	3.27	3.27	1.984	1.388	2.333	7.868	0.303	other	0.51	0.712	1
TCGA-61-2088	51	G3	IIIC	NO MACROSCOPIC DISEASE	0	0	0	4.76	Desert	0.126	PRO_consensus	1726.613	8095.843	6201.314	-971.455	-3361.873	-4087.997	5776.312	-4318.851	-5201.358	-4019.457	-4932.391	-1618.332	707.557	-1288.608	-1288.608	-1382.183	-2310.283	-2335.507	-744.049	-2310.283	2915.018	4896.765	3734.789	3723.075	10533.384	2837.453	2687.778	1.249	1.04	0.386	0.709	0.434	5.102	1.829	1.853	2.687	2.873	0.917	0.785	0.421	1.744	TCGA-61-2088	0.021	0.0	0.041	0.015	0.011	0.037	0.0	0.0	0.023	0.006	0.846	0.104	0.181	0.112	0.087	0.086	0.44	1.683	0.809	0.386	0.421	1.249	2.873	2.873	0.917	1.482	2.377	5.102	0.08	other	0.006	0.42	1
TCGA-61-2092	57	G3	IIIC	NO MACROSCOPIC DISEASE	0	0	0	51.68	Desert	0.078	DIF_consensus	5394.61	8019.241	5982.548	-2390.678	-3433.676	-1464.956	6679.44	-3101.643	-2350.458	-2719.406	-3431.389	-8.601	5860.946	2060.904	2060.904	-164.116	-663.271	-869.011	2763.498	-663.271	2504.336	6299.914	4839.013	3853.914	11228.285	1798.205	1777.032	1.087	0.247	0.237	0.315	0.457	3.112	2.23	0.303	3.325	1.861	0.368	0.595	0.045	0.628	TCGA-61-2092	0.007	0.005	0.024	0.0	0.027	0.015	0.005	0.0	0.003	0.003	0.91	0.106	0.162	0.108	0.079	0.057	0.448	0.898	0.173	0.237	0.045	1.087	1.861	1.861	0.368	1.447	1.839	3.112	0.062	other	0.004	0.275	1
TCGA-61-2102	74	G3	IIIC	nan	0	1	1	6.47	Infiltrated	0.104	PRO_consensus	3324.048	6630.915	6057.695	117.84	-1939.289	-2104.794	5885.698	-2053.088	-2427.705	-3431.768	-3099.834	-524.176	3909.655	654.459	654.459	-285.584	-601.552	-932.142	1260.855	-601.552	3105.758	5127.697	4882.121	2465.074	10909.444	2869.974	6833.686	0.974	1.287	0.587	1.217	1.048	7.393	2.274	0.742	3.163	3.959	1.251	0.521	0.191	2.056	TCGA-61-2102	0.002	0.065	0.053	0.0	0.064	0.052	0.045	0.0	0.01	0.001	0.709	0.094	0.178	0.122	0.099	0.112	0.461	1.048	0.67	0.587	0.191	0.974	3.959	3.959	1.251	1.704	3.583	7.393	0.134	other	0.021	0.427	2
TCGA-61-2109	40	G3	IIIC	>20 MM	1	1	1	20.67	Infiltrated	0.792	DIF_consensus	6687.119	8105.825	7826.17	9.009	-2380.564	-241.524	7465.515	-383.909	762.273	-2607.015	-1227.603	1992.098	7363.974	3156.719	3156.719	556.561	1717.277	1140.108	4012.523	1717.277	3193.004	7769.906	7615.762	5472.218	11079.71	3308.634	3029.637	1.646	1.016	1.177	1.866	2.385	5.306	3.306	1.316	4.036	2.955	0.69	1.786	0.232	1.525	TCGA-61-2109	0.045	0.055	0.081	0.031	0.023	0.016	0.0	0.001	0.021	0.0	0.727	0.107	0.174	0.142	0.097	0.073	0.481	1.955	0.69	1.177	0.232	1.646	2.955	2.955	0.69	1.812	2.107	5.306	0.349	noBRIT	0.752	2.464	1
TCGA-61-2111	61	G3	IV	nan	0	0	0	125.67	Infiltrated	0.092	PRO_consensus	5541.267	7866.786	6370.337	-251.582	1359.194	352.284	7179.209	706.985	513.673	-3139.558	-481.132	2079.167	6463.656	2581.027	2581.027	457.647	904.782	1116.576	3375.104	904.782	3430.462	6589.745	5910.168	5319.198	10789.653	3062.987	3765.931	2.11	2.853	1.223	2.551	2.461	6.036	3.223	1.573	4.043	3.866	2.106	1.341	0.262	2.22	TCGA-61-2111	0.021	0.0	0.098	0.0	0.0	0.022	0.0	0.018	0.02	0.105	0.715	0.107	0.194	0.14	0.1	0.099	0.468	2.241	3.232	1.223	0.262	2.11	3.866	3.866	2.106	1.804	2.589	6.036	0.285	other	0.408	0.571	2
TCGA-61-2113	53	G3	IIC	nan	0	1	1	22.21	Infiltrated	0.096	MES_consensus	5505.108	7438.178	6397.499	806.175	-435.703	2682.759	6970.573	963.973	1761.77	-1844.709	-188.485	4752.771	6182.733	6351.728	6351.728	1597.389	2573.276	3375.235	7217.372	2573.276	5308.995	8561.344	8456.211	5599.526	10846.659	4481.316	6801.932	1.676	2.073	1.12	2.754	3.167	8.174	5.069	3.543	6.026	4.125	1.302	1.115	0.298	2.128	TCGA-61-2113	0.015	0.05	0.098	0.0	0.034	0.026	0.004	0.007	0.029	0.018	0.719	0.093	0.191	0.146	0.119	0.094	0.488	2.364	1.645	1.12	0.298	1.676	4.125	4.125	1.302	2.186	2.976	8.174	0.367	other	0.821	0.677	3
TCGA-OY-A56Q	78	G3	IIA	NO MACROSCOPIC DISEASE	0	0	0	18.92	Desert	0.016	PRO_consensus	2228.485	8722.214	5986.702	-2816.673	-4136.076	-4374.619	6064.182	-4501.838	-3988.634	-4399.885	-4959.842	-2712.424	1650.721	-1610.431	-1610.431	-1588.131	-2636.81	-3086.469	-1138.48	-2636.81	2125.705	5044.525	3832.477	2746.832	10714.84	1643.922	1979.466	1.503	0.347	0.22	0.31	0.399	3.095	1.291	0.396	1.944	2.526	0.742	1.227	0.101	1.245	TCGA-OY-A56Q	0.021	0.0	0.066	0.0	0.0	0.009	0.084	0.0	0.009	0.053	0.758	0.101	0.157	0.128	0.077	0.078	0.424	1.09	0.379	0.22	0.101	1.503	2.526	2.526	0.742	1.325	2.372	3.095	0.081	other	0.006	0.137	1
TCGA-WR-A838	72	G3	IIIC	nan	0	1	1	9.99	Desert	0.046	PRO_consensus	3652.455	8448.891	6068.094	-1903.077	-4201.589	-3282.677	6989.151	-4372.301	-3638.717	-4068.714	-4929.954	-948.727	4021.25	1578.247	1578.247	-1409.265	-1077.993	-1309.09	2359.884	-1077.993	1930.461	6724.682	6883.453	4825.736	11200.057	2439.361	2735.611	1.236	0.602	0.403	0.505	0.604	4.885	2.544	1.02	3.519	1.501	0.935	0.897	0.113	1.044	TCGA-WR-A838	0.016	0.001	0.048	0.0	0.013	0.017	0.0	0.001	0.014	0.013	0.876	0.102	0.163	0.112	0.082	0.055	0.438	1.239	0.076	0.403	0.113	1.236	1.501	1.501	0.935	1.378	1.993	4.885	0.119	other	0.015	0.258	1